Structure of PDB 5t2a Chain P Binding Site BS01 |
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| >5t2a Chain A (length=1603)
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agaccugaguguggcaggacuacccgccgaacuuaagcauauuacucagc
ggaggaaaagaaaacaaccgugauucucucagugagcggcgagcgaagag
ggaacgaacucguugccgaaucgggucuuacaaggccuugaguuguggca
caaauaucugguuggugcaggaguggcgaaauucaagcgcaaagcaaacc
cguugcugaauacaacccuucaugugaguauugagccaaagaagguguua
gcccauugagccauaaaccugagcgccucaugaagcgaguagcacuguuu
gggaaugcagugucaaguuggcagguauuugucugccaaaguuaaauaca
gaguaggaagaccgauagcgaacaaguagcgugagcgaaaguuugaaaag
cacuuuggaaagagagugaaauagaaccugaagucgugacaaagacaaug
gaaguaccuccauuucaacggccagaaccagcccuacugcauuauccugu
cgggggucaaaauccggcgggcaaaagugcaagaauuuugggucuuggug
aaaugagcggaguauuugagcugugcacggccgcacgcacugguuucuuc
uccgugaugcuccauguuggcgaugaaauggggugcccccacccgucuug
aaacacggaccaaggagucaaacagacgcgcaagggaggagauaugguug
ccaguacuucucucguacugaaagggagaugcaauaugcaucuguggugu
gcacacgucauuugcccaacaccgaccggcccuggguugcguuggagugu
gccuguuuggacccgaaagguggugaacuaugccugaacaaggugaagcc
cggggaaacccagguggaggccuguagcgaugcugacgugcaaaucgcuc
guaugauuuggguaucggagcgaaagacucaucgaaccaccuaguagcug
guucacaucgaaguuucccucaggauagcuggugcuaguagaaguauugu
gcgguaaagcaaaugauuagagggaccuauucucaaacuuuaaaugugca
aacaaaccgugccuuagccaacugcaaggccggaaagaaaagaauuagag
gcaccaagugggccuucuucgguaagcggagcaggcgaugcggaaugaac
cgcuuagggauauguggcgucaaaacuuaugggcucauucucgauacgug
aaaaggguguugguggauaaauccaccggccccgaaaauggaugacgcuu
aagcccaauuagugguugcccauuauuccuuugguaagggcggaaacaaa
cggagaaaguguagcccuuccgauguagauguggccuggagguuaggacg
aagcuuauggcgugagccuaagauggaccggccucuagugcagaucuugg
uuggcguagcaaagaucuaacggagauauacaacaugcaacguuggauac
uggagcggggaaggauuucgugccaacggcacucguacacgaguuguucg
gaaacugagcacaacguuauaucguuuuguuaggaaagugaagguacuga
aaaggggcaacagagaaccugggauuauauuccaaaaagaaauugcaugu
ggg |
......................<<<<<......<......>.......>>
>>.>.........<<....>>..<<<<<<......<<.....>>....>>
>>>>...<<<...<<<<...<<<<<<<......>>>>>.>>.....>>>>
..........<..<<....<<....<......<<<<......<<<<....
...>>>>.....<<........>>......>>>><<.......((.....
>>)).......>......>>......>>>............<<<<<<<..
......>>>>>>>......<<<<<........>>>>>..>>>........
............................<<....>>..............
..<<<<....>>>>..................................((
(..<<<<<<.<<<<<<..((.<<<<.<<<<<<<<....<<<<<..<<<<<
<<<<........>>>>>>>>>...>>.>>>.........>>>>..>>>>.
.......<<<<<.....<<...<<<..<<..>>....>>>...>.>...>
>>>>.....<<<<...>>>>))..>>>>>>>>>>>>..))).<<<<....
....>>>><<<<<<....<<<<<<<.<<<<<..<<<...<<.<.......
.....>>>...>>>...<<....>>..<<<<<.....>>>>>...<<<<<
...<<.<<.>>.>>....>>>>><<<<<<<<<.>>>>>>.>>>...>>>>
>.>>>>>>>..<<.<..<<<<<<<.....<<<<<<<<<..<<<....<<<
.<<<....>>>.>>>.....>>>...<<<..<<.<<........>>>>.>
>>....>>>>>>>>>...<<.......>>......>>>>>>...>..>.>
>...<<<<<....<.<<<....>>>.><<<<<<<<<.....<<...<<<<
<<<...<<<....<<<....<<<..>>>....>>>..>.>>...>>>>>>
>.....<<<.<<<<<.<<.....>>>>>>>>>>...........>>...>
>>>>>>.>>..<<<<.<<<<<.....>>>>>.>>>>...<<<<......>
>>>..<<<<<<<...<<<(((......<..<<<<........<.......
....<<<.<<<<<<<<<<..>>>>>>>>>>>>>..........))).>..
..>>>>.>.........>>>...>>>>>>>((((.<<<<<..........
.>>>>.........>>>>>))))....>>>>>....<<<<<<<<......
...<<<..<<<....>>>.>>>.......>>>>>>>>........>>>>>
>..............<<<<<<<..................>>>>>>>...
.................<<<<<....<<.....>>..>>>>>....<<..
........<<.<<<<<......>>>>...............<<...>>..
....>.>>..........<<<...........>....>>.>>........
... |
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| PDB | 5t2a Structures and stabilization of kinetoplastid-specific split rRNAs revealed by comparing leishmanial and human ribosomes. |
| Resolution | 2.9 Å |
Binding residue
(original residue number in PDB) | T2 Y4 S5 R6 K16 K18 R23 H25 Y26 K27 F30 R42 R49 Q50 L52 T55 R62 Y63 G65 K66 R82 R85 M92 K96 N97 A100 N101 N110 Q118 V119 D120 R127 R131 A132 H133 G134 Y139 |
Binding residue
(residue number reindexed from 1) | T1 Y3 S4 R5 K15 K17 R22 H24 Y25 K26 F29 R41 R48 Q49 L51 T54 R61 Y62 G64 K65 R81 R84 M91 K95 N96 A99 N100 N109 Q117 V118 D119 R126 R130 A131 H132 G133 Y138 |
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| Enzyme Commision number |
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