Structure of PDB 7oya Chain O2 Binding Site BS01

Receptor Information
>7oya Chain O2 (length=133) Species: 7955 (Danio rerio) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDE
SSPYAAMLAAQDVAQKCKELGITALHIKLRATGGNRTKTPGPGAQSALRA
LARSGMKIGRIEDVTPIPSDSTRRKGGRRGRRL
Ligand information
>7oya Chain 22 (length=1531) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
uaccugguugauccugccaguaauauaugcuugucucaaagauuaagcca
ugcaagucuaagugcacacgagugaaacugcgaauggcucauuaaaucag
uuaugguuccuuugaucacuuggauaacuguggcaauuccagagcuaaua
caugcgcgccgagacgcgugcauuuaucaguggugacucuagauaaccuc
gggccgaucgcgcgccggcggcgacgguucauucgaaugucugcccuauc
aacuuucgaugguagguccgucgccuaccauggugaccacgggugacggg
gaaucaggguucgauuccggagagggagccugagaaacggcuaccacauc
caaggaaggcagcaggcgcgcaaauuacccauuuccgacacggagaggua
gugacgaaaaauaacaaugaauuggaaugagugcaucccaaacccauggg
cgaggacccauuggagggcaagucuggugccagcagccgcgguaauucca
gcuccaauagcguaugcuaacguugcugcaguuaaaaagcucguaguugg
aucucuacuuugaaaaaauuagaguguucaaggcagggccccccauugaa
uaccccagcuaggaauaauggaauaggaccccggggccaugaucgagagg
gacggccgggggcauucguauugcgccgcuagaggugaaauucuuggacc
ggcgcaagacggaccggagcgaaagcguuugccaagaacguuuucauuaa
ucaagaacgaaagucggagguucgaagacgaucagauaccgucguaguuc
cgaccguaaacgaugccgacccgcgauccggcggcguuugacccgccggg
cagcguugcgggaaaccacgagucucugggcuccggggggaguaugguug
caaagcugaaacuuaaaggaauugacggaagggcaccaccaggaguggag
ccugcggcuuaauuugacucaacacggggaaccucacccggcccggacac
ggaaaggauugacagauugacggcucuuucucgauucugugggugguggu
gcauggccguucguaguugguggagcgauuugucugguugauuccgauaa
cgaacgagacucuggcaugcuaacuaguuacgcggccgucggcguaacuu
cuuagagggacaaguggcguucagccacgcgagacugagcaauaacaggu
cugugaugcccuuagauguccggggcugcacgcgcgccacaaugggcgga
ucaacguguccugcgccgacaggcgcggguaacccguugaaccccgcccg
ugauggggaccgauugaaacuauuucccgagaacgaggaauucccaguaa
gcgcaggucaucagcuugcguugauuaagucccugcccuuuguacacacc
gcccgucgcuacuaccgauugagcggcucagugagguccucggaucgcga
gaagacgaucgaacucggucguuuagaggaaguaaaagucguaacaaggu
uuccguaggugaaccugcggaaggaucauua
...<<<<<.[.((((>>>>><<.<<<<<<<...<.<<..<......<<<.
<<<..<<....<<.............>>.>>......<<........<<<
.<<<..<<....<<<.....<<.....<<.<<<.....>>>.>>......
>>....<<<......>>>.<<..<<<<<...<......>..>>>>>....
..>>...<<<<.<<<..>>>>>>>....>>>...>>>>>.>>>.<<<...
.<<<....<<<<<<<<.......>>>>>>>>>>>......>>>...<<<.
<<<<....>>>>....>>>.>>.<<.<<<..........>>>.>>.<.<<
....>>.>...>>>>>>.........<<<....<<<<...>>>>..>>>.
.>...>>.>.....<<<....>>>......<<.<<<.........>>>.>
>.........<<<<<((......<<<<.....<<..))>>.......>>>
>.>>>>>..>>>>>>>.>>.........<.<((.....<.<<...<<<.<
<....<<<<<.<.......<<...<.......>...<<....>>......
>>......>.>>>..>>.........<.<<<..>>>.>....>>....<<
<<<<..<...<<<<..<<..<<<<<<<<...<<<......>>>......>
>>>>>>>..>>.......<<....>>...>>>>..>..>>>.>>>...>>
>...>>.>....<<<<<<<...<...<<<<.<.....>.>>>>...>>>>
>>>>..........<<<.<<.<<<..<<<<<<<<.<<<.>>>>>>>>>>>
..>>>....<<..))>>....>>.....>>>.>.>.<<<......<<<..
....>>>....>>>..)))).]<<<<<.<<<<<<...<...<<<<<...<
<.<<<<<<......<<........>>..........<<<<<.<.......
.<........<<..<<........>>..>>.......>....<.<<.<<<
..<<.<<<<<<....<<<.<<<<<....>>>...<<<......>>>...>
>.>>>....<<<.......<<<<..<<<<<<<<<<<.>>>.>>>>>>>>.
.>>>>........<<<<<.....>>>>>........>>>....>>>.>>>
.....>>>>>>>>....>.>>>>>...>>.>>>>.>>......<<<<<<.
.......<.<<<<<<<<....>>>>>>>>....>.........>>>>>>.
..........<<<...........>>..>..........>>>>>.....<
<<<<<<<.......>>>>>>>>.......>....>>>>>>>>>.>>....
<..<<.<..<<<<.<<....<<<<<<<<.<<<..<<<<.<<...<<..>>
...>>.>>>>..>>>.>>>>>>>>...>>.>>>>...>.>>...>.....
<<<<<<<<<<..>>>>>>>>>>.........
Receptor-Ligand Complex Structure
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PDB7oya A molecular network of conserved factors keeps ribosomes dormant in the egg.
Resolution3.2 Å
Binding residue
(original residue number in PDB)		H32 F34 N38 D39 F41 H43 G49 K50 E51 T52 R55 T57 G59 M60 D65 R66 E68 G102 R104 I135 P136 S137 D138 R141 K143 G144 G145 R146 R147 R149 R150 L151
Binding residue
(residue number reindexed from 1)		H14 F16 N20 D21 F23 H25 G31 K32 E33 T34 R37 T39 G41 M42 D47 R48 E50 G84 R86 I117 P118 S119 D120 R123 K125 G126 G127 R128 R129 R131 R132 L133
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0000028 ribosomal small subunit assembly
GO:0006412 translation
GO:0043009 chordate embryonic development
GO:0043249 erythrocyte maturation
GO:0048821 erythrocyte development
Cellular Component
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
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Biological Process
View graph for
Cellular Component
External links
PDB RCSB:7oya, PDBe:7oya, PDBj:7oya
PDBsum7oya
PubMed36653451
UniProtQ6PBW3

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