Structure of PDB 5z3v Chain O Binding Site BS01

Receptor Information
>5z3v Chain O (length=576) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
LLDQTKDTRITHLLRQTNAFLDYYNVAHRIKEDIKKQPSILVGGTLKDYQ
IKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEMKNIRGPYLV
IVPLSTLSNWSSEFAKWAPTLRTISFKGSPNERKAKQAKIRAGEFDVVLT
TFEYIIKERALLSKVKWVHMIIDEGHRMKNAQSKLSLTLNTHYHADYRLI
LTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFDKIELSEEETL
LVIRRLHKVLRPFLLRRLKKDVEKELPDKVEKVVKCKMSALQQIMYQQML
KYRGFNNQIMQLKKICNHPFVFEEVEDQINPTRETNDDIWRVAGKFELLD
RILPKLKATGHRVLIFFQMTQIMDIMEDFLRYINIKYLRLDGHTKSDERS
ELLRLFNAPDSEYLCFILSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQA
QDRAHRIGQKNEVRILRLITTNSVEEVILERAYKKLDIDGKVIQAGKFDN
KSTSEEQEALLRSLLDAEEERRKKREEELKDSEINEILARNDEEMAVLTR
MDEDRSKKEKSRLREESESAAVYNGR
Ligand information
>5z3v Chain I (length=146) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
tcgagaatcccggtgccgaggccgctcaattggtcgtagacagctctagc
accgcttaaacgcacgtacgcgctgtcccccgcgttttaaccgccaaggg
gattactccctagtctccaggcacgtgtcagatatatacatcctga
Receptor-Ligand Complex Structure
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PDB5z3v Mechanism of DNA translocation underlying chromatin remodelling by Snf2.
Resolution4.22 Å
Binding residue
(original residue number in PDB)
L825 R854 E874 Y875 K878 F1048 N1049 M1112 T1113 G1135 S1162 A1165
Binding residue
(residue number reindexed from 1)
L104 R133 E153 Y154 K157 F305 N306 M369 T370 G392 S419 A422
Enzymatic activity
Enzyme Commision number 3.6.4.-
Gene Ontology
Molecular Function
GO:0005524 ATP binding
GO:0042393 histone binding
GO:0140658 ATP-dependent chromatin remodeler activity

View graph for
Molecular Function
External links
PDB RCSB:5z3v, PDBe:5z3v, PDBj:5z3v
PDBsum5z3v
PubMed30867599
UniProtP22082|SNF2_YEAST Transcription regulatory protein SNF2 (Gene Name=SNF2)

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