Structure of PDB 8ys4 Chain N Binding Site BS01

Receptor Information
>8ys4 Chain N (length=41) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PTCGAHEFQCSTSSCIPISWVCDDDADCSDQSDESLEQCGR
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain8ys4 Chain N Residue 301 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8ys4 The receptor VLDLR binds Eastern Equine Encephalitis virus through multiple distinct modes.
Resolution4.8 Å
Binding residue
(original residue number in PDB)		W210 D213 D215 D217 D223 E224
Binding residue
(residue number reindexed from 1)		W20 D23 D25 D27 D33 E34
Annotation score4
External links
PDB RCSB:8ys4, PDBe:8ys4, PDBj:8ys4
PDBsum8ys4
PubMed39127734
UniProtP98155|VLDLR_HUMAN Very low-density lipoprotein receptor (Gene Name=VLDLR)

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