Structure of PDB 6gov Chain N Binding Site BS01
Receptor Information
>6gov Chain N (length=110) Species:
10710
(Lambdavirus lambda) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
LGSMDAQTRRRERRAEKQAQWKAANPLLVGVSAKPVNRPILSLNRKPKSR
VESALNPIDLTVLAEYHKQIESNLQRIERKNQRTWYSKPGERGITCSGRQ
KIKGKSIPLI
Ligand information
>6gov Chain L (length=37) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
gttatccgctcacaatgccacacgcctaacgagccgg
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
6gov
Structural Basis for the Action of an All-Purpose Transcription Anti-termination Factor.
Resolution
3.7 Å
Binding residue
(original residue number in PDB)
R76 K98
Binding residue
(residue number reindexed from 1)
R79 K101
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0001000
bacterial-type RNA polymerase core enzyme binding
GO:0001072
transcription antitermination factor activity, RNA binding
GO:0003677
DNA binding
GO:0003723
RNA binding
GO:0003727
single-stranded RNA binding
GO:0005515
protein binding
GO:0035613
RNA stem-loop binding
GO:0070063
RNA polymerase binding
Biological Process
GO:0006353
DNA-templated transcription termination
GO:0006357
regulation of transcription by RNA polymerase II
GO:0031564
transcription antitermination
GO:0032784
regulation of DNA-templated transcription elongation
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:6gov
,
PDBe:6gov
,
PDBj:6gov
PDBsum
6gov
PubMed
30795892
UniProt
P03045
|REGN_LAMBD Antitermination protein N (Gene Name=N)
[
Back to BioLiP
]