Structure of PDB 1a6v Chain N Binding Site BS01

Receptor Information
>1a6v Chain N (length=109) Species: 10090 (Mus musculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
QAVVTQESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLI
GGTNNRAPGVPARFSGSLIGNKAALTITGAQTEDEAIYFCALWYSNHWVF
GGGTKLTVL
Ligand information
Ligand IDNPC
InChIInChI=1S/C14H18N2O6/c17-12-6-5-10(8-11(12)16(21)22)9-13(18)15-7-3-1-2-4-14(19)20/h5-6,8,17H,1-4,7,9H2,(H,15,18)(H,19,20)/p-1
InChIKeyXAYGJFACOIKJCT-UHFFFAOYSA-M
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0c1cc(c(cc1CC(=O)NCCCCCC(=O)[O-])[N+](=O)[O-])O
CACTVS 3.341Oc1ccc(CC(=O)NCCCCCC([O-])=O)cc1[N+]([O-])=O
ACDLabs 10.04O=[N+]([O-])c1cc(ccc1O)CC(=O)NCCCCCC([O-])=O
FormulaC14 H17 N2 O6
Name4-HYDROXY-3-NITROPHENYLACETYL-EPSILON-AMINOCAPROIC ACID ANION
ChEMBL
DrugBankDB08295
ZINC
PDB chain1a6v Chain J Residue 430 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB1a6v A Functional Antibody Mutant with an Insertion in the Framework Region 3 Loop of the Vh Domain: Implications for Antibody Engineering
Resolution1.8 Å
Binding residue
(original residue number in PDB)		T31 S32 Y34 W93
Binding residue
(residue number reindexed from 1)		T31 S32 Y34 W93
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0002250 adaptive immune response
GO:0006955 immune response
Cellular Component
GO:0005615 extracellular space
GO:0019814 immunoglobulin complex

View graph for
Biological Process
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Cellular Component
External links
PDB RCSB:1a6v, PDBe:1a6v, PDBj:1a6v
PDBsum1a6v
PubMed
UniProtP01724|LV1B_MOUSE Ig lambda-1 chain V regions MOPC 104E/RPC20/J558/S104

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