Structure of PDB 8ffi Chain M Binding Site BS01

Receptor Information
>8ffi Chain M (length=419) Species: 429344 (Maribacter polysiphoniae) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RNKIFISHATPDDNDFTRWLALKLIGLGYEVWCDILFLDKGVDFWSNIEK
VIREDTCKFLLVSSSYSNQREGVLKELAVAAKVKKQLKDDKFIIPLAIDE
QLSYDDINIDIVRLNAIDFKMSWARGLKDILEAFEKQKVPKEVADASKSN
LLYQQIFLHDKSVIEKEEIYDSNWLSILSFPEELRFHEYNWMLPKRFDVR
ELTFPAVRYKNYLCTFAWAYDFTYHLPKTETYHKSKTIRIPTEEILSGSY
DSNFIRNAECKRLIVQLLNKAFELRMKDKEVQEYEMSNKTAYWLEKGKLE
KDKFEKTMLVGKQKDKNWHFAISGASKLYPFPVLMISSHIFFTADGKKLI
DSSSVQHSSRRRQGKNWWNNTWRTKLLAFIKYLSDDDTSFYLEMGSEEKV
FVSNEPVKFKGNVSYNIPE
Ligand information
>8ffi Chain O (length=21) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ugacggcucuaaucuauuagu
.....................
Receptor-Ligand Complex Structure
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PDB8ffi Oligomerization-mediated activation of a short prokaryotic Argonaute.
Resolution2.7 Å
Binding residue
(original residue number in PDB)		K211 E260 M287 S288 R362
Binding residue
(residue number reindexed from 1)		K210 E259 M286 S287 R361
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0007165 signal transduction

View graph for
Biological Process
External links
PDB RCSB:8ffi, PDBe:8ffi, PDBj:8ffi
PDBsum8ffi
PubMed37494956
UniProtA0A316E683

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