Structure of PDB 6nca Chain M Binding Site BS01
Receptor Information
>6nca Chain M (length=275) Species:
9606
(Homo sapiens) [
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GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAP
WIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYG
CDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAA
HVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEAT
LRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVP
SGQEQRYTCHVQHEGLPKPLTLRWE
Ligand information
>6nca Chain 1 (length=9) Species:
10376
(human gammaherpesvirus 4) [
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YVLDHLIVV
Receptor-Ligand Complex Structure
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PDB
6nca
CDR3 alpha drives selection of the immunodominant Epstein Barr virus (EBV) BRLF1-specific CD8 T cell receptor repertoire in primary infection.
Resolution
3.3 Å
Binding residue
(original residue number in PDB)
Y7 E63 K66 H70 T73 D77 T80 L81 Y99 T143 W147 Q155 Y159 T163
Binding residue
(residue number reindexed from 1)
Y7 E63 K66 H70 T73 D77 T80 L81 Y99 T143 W147 Q155 Y159 T163
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:6nca
,
PDBe:6nca
,
PDBj:6nca
PDBsum
6nca
PubMed
31765434
UniProt
P04439
|HLAA_HUMAN HLA class I histocompatibility antigen, A alpha chain (Gene Name=HLA-A)
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