Structure of PDB 6jy4 Chain M Binding Site BS01

Receptor Information
>6jy4 Chain M (length=40) Species: 9913 (Bos taurus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ITAKPAKTPTSPKEQAIGLSVTFLSFLLPAGWVLYHLDNY
Ligand information
Ligand IDCQX
InChIInChI=1S/C18H36O7/c1-2-3-4-5-6-7-8-9-10-23-11-12-24-18-17(22)16(21)15(20)14(13-19)25-18/h14-22H,2-13H2,1H3/t14-,15-,16+,17+,18+/m1/s1
InChIKeyVOSUWWUWOMLIMI-ZBRFXRBCSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 2.0.7CCCCCCCCCCOCCO[C@@H]1[C@H]([C@H]([C@@H]([C@H](O1)CO)O)O)O
CACTVS 3.385CCCCCCCCCCOCCO[CH]1O[CH](CO)[CH](O)[CH](O)[CH]1O
OpenEye OEToolkits 2.0.7CCCCCCCCCCOCCOC1C(C(C(C(O1)CO)O)O)O
CACTVS 3.385CCCCCCCCCCOCCO[C@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@@H]1O
FormulaC18 H36 O7
Name(2S,3S,4S,5S,6R)-2-(2-decoxyethoxy)-6-(hydroxymethyl)oxane-3,4,5-triol;
3-Oxatridecyl-alpha-D-mannopyranoside
ChEMBL
DrugBank
ZINC
PDB chain6jy4 Chain A Residue 609 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6jy4 Monomeric structure of an active form of bovine cytochromecoxidase.
Resolution1.95 Å
Binding residue
(original residue number in PDB)		P9 T10 Q15
Binding residue
(residue number reindexed from 1)		P9 T10 Q15
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0006123 mitochondrial electron transport, cytochrome c to oxygen
Cellular Component
GO:0045277 respiratory chain complex IV

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Biological Process
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Cellular Component
External links
PDB RCSB:6jy4, PDBe:6jy4, PDBj:6jy4
PDBsum6jy4
PubMed31533957
UniProtP10175|COX8B_BOVIN Cytochrome c oxidase subunit 8B, mitochondrial (Gene Name=COX8B)

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