Structure of PDB 6j4w Chain M Binding Site BS01

Receptor Information
>6j4w Chain M (length=64) Species: 644223 (Komagataella phaffii GS115) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
IKQKLETQFTCLFCNHDNSVVCTLDKKNSIGLLECKKCNLSFQAPINSLS
QPIDIYSDWIDACE
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain6j4w Chain M Residue 201 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB6j4w Structural insight into nucleosome transcription by RNA polymerase II with elongation factors.
Resolution7.9 Å
Binding residue
(original residue number in PDB)		C25 C49 L54
Binding residue
(residue number reindexed from 1)		C11 C35 L40
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0000993 RNA polymerase II complex binding
GO:0046872 metal ion binding
Biological Process
GO:0006368 transcription elongation by RNA polymerase II
Cellular Component
GO:0005634 nucleus
GO:0008023 transcription elongation factor complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6j4w, PDBe:6j4w, PDBj:6j4w
PDBsum6j4w
PubMed30733384
UniProtC4QZ45

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