Structure of PDB 4tsz Chain M Binding Site BS01
Receptor Information
>4tsz Chain M (length=363) Species:
287
(Pseudomonas aeruginosa) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
HMHFTIQREALLKPLQLVAGVVEQTLPVLSNVLLVVEGQQLSLTGTDLEV
ELVGRVVLEDAAEPGEITVPARKLMDICKSLPNDVLIDIRVEEQKLLVKA
GRSRFTLSTLPANDFPEGPGSLNFSIAQSKLRRLIDRTSFAMAQQDVRYY
LNGMLLEVNGGTLRSVATDGHRLAMCSLDAQIPSQDRHQVIVPRKGILEL
ARLLTEQDGEVGIVLGQHHIRATTGEFTFTSKLVDGKFPDYERVLPRGGD
KLVVGDRQQLREAFSRTAILSNEKYRGIRLQLSNGLLKIQANNPEQEEAE
EEVQVEYNGGNLEIGFNVSYLLDVLGVIGTEQVRFILSDSNSSALVHEAD
NDDSAYVVMPMRL
Ligand information
>4tsz Chain 3 (length=5) Species:
32630
(synthetic construct) [
Search peptide sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
QFDLF
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
4tsz
Differential Modes of Peptide Binding onto Replicative Sliding Clamps from Various Bacterial Origins.
Resolution
2.0 Å
Binding residue
(original residue number in PDB)
T172 G174 H175 P243 Y245 V248 Y324 N345 M363 P364 M365 R366
Binding residue
(residue number reindexed from 1)
T168 G170 H171 P239 Y241 V244 Y320 N341 M359 P360 M361 R362
Enzymatic activity
Enzyme Commision number
2.7.7.7
: DNA-directed DNA polymerase.
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0003887
DNA-directed DNA polymerase activity
GO:0008408
3'-5' exonuclease activity
Biological Process
GO:0006260
DNA replication
GO:0006271
DNA strand elongation involved in DNA replication
GO:0071897
DNA biosynthetic process
Cellular Component
GO:0005737
cytoplasm
GO:0009360
DNA polymerase III complex
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:4tsz
,
PDBe:4tsz
,
PDBj:4tsz
PDBsum
4tsz
PubMed
25170813
UniProt
Q9I7C4
|DPO3B_PSEAE Beta sliding clamp (Gene Name=dnaN)
[
Back to BioLiP
]