Structure of PDB 3zn8 Chain M Binding Site BS01

Receptor Information
>3zn8 Chain M (length=106) Species: 2287 (Saccharolobus solfataricus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
LLTLRDVYAQIIALRKMGPLSKVLQHIPGLGIMLPTPSEDQLKIGEEKIR
RWLAALNSMTYKELENPNIIDKSRMRRIAEGSGLEVEEVRELLEWYNNMN
RLLKMV
Ligand information
>3zn8 Chain G (length=88) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
uggugcagcgcagcgcggacgcccgaaccuggucagagccggaaggcagc
agccauaagggaugcuuugcgggugccguugccuuccg
<<<.<.....<<.<<<<<.<<<<<.....<<<<..<.<<......>>..>
.>>>>...>>>.>>..>>>>>..>>.......>..>>>
Receptor-Ligand Complex Structure
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PDB3zn8 Structural Basis of Signal Sequence Surveillance and Selection by the Srp-Sr Complex
Resolution12.0 Å
Binding residue
(original residue number in PDB)		R340 K373 R376 A379 N382 S383 M384 T385 Y386 S398 R399 R402 G406 S407
Binding residue
(residue number reindexed from 1)		R15 K48 R51 A54 N57 S58 M59 T60 Y61 S73 R74 R77 G81 S82
Enzymatic activity
Enzyme Commision number 3.6.5.4: signal-recognition-particle GTPase.
Gene Ontology
Molecular Function
GO:0003924 GTPase activity
GO:0005525 GTP binding
GO:0008312 7S RNA binding
Biological Process
GO:0006614 SRP-dependent cotranslational protein targeting to membrane
Cellular Component
GO:0048500 signal recognition particle

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Cellular Component
External links
PDB RCSB:3zn8, PDBe:3zn8, PDBj:3zn8
PDBsum3zn8
PubMed23563142
UniProtQ97ZE7|SRP54_SACS2 Signal recognition particle 54 kDa protein (Gene Name=srp54)

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