Structure of PDB 3qmn Chain M Binding Site BS01

Receptor Information
>3qmn Chain M (length=126) Species: 243277 (Vibrio cholerae O1 biovar El Tor str. N16961) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AMIVGLGTDIAEIERVEKALARSGENFARRILTDSELEQFHASKQQGRFL
AKRFAAKEAASKALGTGIAQGVTFHDFTISHDKLGKPLLILSGQAAELAS
QLQVENIHLSISDERHYAMATVILER
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain3qmn Chain M Residue 2533 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB3qmn Structural characterization and comparison of three acyl-carrier-protein synthases from pathogenic bacteria.
Resolution1.85 Å
Binding residue
(original residue number in PDB)
D8 E57
Binding residue
(residue number reindexed from 1)
D9 E58
Annotation score1
Enzymatic activity
Catalytic site (original residue number in PDB) K61 D112
Catalytic site (residue number reindexed from 1) K62 D113
Enzyme Commision number 2.7.8.7: holo-[acyl-carrier-protein] synthase.
Gene Ontology
Molecular Function
GO:0000287 magnesium ion binding
GO:0008897 holo-[acyl-carrier-protein] synthase activity
GO:0016740 transferase activity
GO:0046872 metal ion binding
Biological Process
GO:0006633 fatty acid biosynthetic process
Cellular Component
GO:0005737 cytoplasm

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:3qmn, PDBe:3qmn, PDBj:3qmn
PDBsum3qmn
PubMed22993090
UniProtQ9KPB6|ACPS_VIBCH Holo-[acyl-carrier-protein] synthase (Gene Name=acpS)

[Back to BioLiP]