Structure of PDB 2j56 Chain M Binding Site BS01

Receptor Information

>2j56 Chain M (length=124) Species: 266 (Paracoccus denitrificans)

TDPRAKWVPQDNDIQACDYWRHCSIDGNICDCSGGSLTNCPPGTKLATAS
WVASCYNPTDGQSYLIAYRDCCGYNVSGRCPCLNTEGELPVYRPEFANDI
IWCFGAEDDAMTYHCTISPIVGKA

Ligand information

• Ligand ID: CU
• InChI: InChI=1S/Cu/q+2
• InChIKey: JPVYNHNXODAKFH-UHFFFAOYSA-N
• SMILES:
  ACDLabs 10.04
  OpenEye OEToolkits 1.5.0: [Cu+2]
  CACTVS 3.341: [Cu++]
• Formula: Cu
• Name: COPPER (II) ION
• DrugBank: DB14552
• PDB chain: 2j56 Chain A Residue 1106

Receptor-Ligand Complex Structure

Structure summary

• PDB: 2j56 Tracking X-Ray-Derived Redox Changes in Crystals of a Methylamine Dehydrogenase/Amicyanin Complex Using Single-Crystal Uv/Vis Microspectrophotometry.
• Resolution: 2.1 Å
• Binding residue (original residue number in PDB): K129 A130
• Binding residue (residue number reindexed from 1): K123 A124
• Annotation score: 5

Enzymatic activity

• Enzyme Commision number: 1.4.9.1: methylamine dehydrogenase (amicyanin).

Gene Ontology

Molecular Function

• GO:0016491 oxidoreductase activity
• GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors
• GO:0052876 methylamine dehydrogenase (amicyanin) activity

Biological Process

• GO:0009308 amine metabolic process

Cellular Component

• GO:0030288 outer membrane-bounded periplasmic space
• GO:0042597 periplasmic space

External links

• PDB: RCSB:2j56, PDBe:2j56, PDBj:2j56
• PDBsum: 2j56
• PubMed: 17211075
• UniProt: P22619|DHML_PARDE Methylamine dehydrogenase light chain (Gene Name=mauA)