Structure of PDB 8onz Chain LY Binding Site BS01

Receptor Information
>8onz Chain LY (length=134) Species: 759272 (Thermochaetoides thermophila DSM 1495) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MKVRPTVSSSRRKARKAHFSAPSSVRRVIMSAPLSKELREKYNVRSIPIR
KGDEVQIVRGAHKDKEGKVTSVYRLKYVIHVERVTREKATGQTVPIGIHP
SNVVITKLHLDKDRENILARIKAGREQVAKAKGK
Ligand information
>8onz Chain 1 (length=270) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
augaaaagcacuuugaaaagaggguuaaauagcaccuucaaugagaacuu
gaaguuccaugugaacagcgguuggacauggguugccgguuaauauuccg
gcacccggaagagcccgacacuucugucgggucaaggguugggcacguug
ggcuuugggcgcgcccugggagcagagggccucuagccgggcaaccggcc
ggcggcccucagcacccgggguagcccuuagcaggcuucggccguccggc
gugcgguuaacaaccaacuu
..........<<<<....>>>>.............<<<<<<.......>>
>>>>..<<<<<<...<<.....>>.>>>>>>...<<<<<........>>>
>>..........<<<<<<<......>>>>>>>.<<<<<<<<.<<<<<<<.
..<<..<<<<...<<<<<<<.<<.<<<<<<<.<<.<<<<<....>>>>>.
>>.>>>>>>>.>>.>>>>>>>..>>>>..>>..<<<....>>>....>>>
>>>>......>>>>>..>>>
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB8onz Methionine aminopeptidase 2 and its autoproteolysis product have different binding sites on the ribosome.
Resolution2.94 Å
Binding residue
(original residue number in PDB)		K76 R86 K88 A89 T90
Binding residue
(residue number reindexed from 1)		K76 R86 K88 A89 T90
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
GO:0042273 ribosomal large subunit biogenesis
Cellular Component
GO:0005840 ribosome
GO:0015934 large ribosomal subunit
GO:0022625 cytosolic large ribosomal subunit

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:8onz, PDBe:8onz, PDBj:8onz
PDBsum8onz
PubMed38267453
UniProtG0RYN9

[Back to BioLiP]