Structure of PDB 6rm3 Chain LW0 Binding Site BS01

Receptor Information
>6rm3 Chain LW0 (length=90) Species: 6039 (Vairimorpha necatrix) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MIDGISIYSGRAIPKGSSTVRITNDGKQQLTANKKERSLISRKINPKLVK
WTIPSRVVRKKHELFTSSQKNIPRPARIERGFRNISADLL
Ligand information
>6rm3 Chain L50 (length=2313) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
uacccacacaugggaucaauaggauaccauaacgaugaaggucguaauag
aauacgaaaguauuuaccuaauuaauauauuaauguauugauaacccuuu
gaacuuaagcauaucauuaaaaggaggaaaagaaacuaacuaggauuucu
uuaguagcagcgagugaacaagaaauaacccuccauuguaauccuuaauu
ggaguuguaaaugguuuauucuauuaauuauuauagagaauauauucguu
auuaauagaauagaauaauguacuugaguagagcugcuugguagugcagu
uugaauaaagguagaaugaaauaucuaagguuaaauauaaugguauaccg
auagaaaauaaguacugcgaaggaacuugugaaaauguguggaguuuagc
cuuauuuuuaaggacccgucuugaaacacggaccaaggagauuauaauua
uagcaagauaaaaauaaucuuuauuaacuugauuaguuauaauuauaaga
cccgaaacacagugaacuauacauguucugguugaagauaagcaaguuua
uuggaagaccauaaucauucugacgugcaaaucgaugauuuaagaugugu
auaguggcgaaagaccaaucgaacugugugguagcugguucacagcgaaa
ugucucucaggacagcaguuauuauuauauaggacauagauguaggacac
uguuauaguuaacuaugagaaaucuuuaauucuauggaauuauauaaauu
aaauuuauauaaugaaucuauuguauaacuagugggcacaugauuguaag
aaugaugugcaaaaagggaugaaccuuaugaaacauuaaauauucuaaau
aguagauauuauaccauaaauaugaugaauacauguauuauuguauaaaa
uggaagaagauuacuacuuuuaugagauguuucuaauauuuagguagcug
ugcaauuuguuuguauugaaguauauaugugaguauauauagaagaaaca
aaugagccgaucuuggaggcaguaacaauauauguauagauauagacuag
gguuuucaauuuauugaagugaaucgguguuauauaaaaacaaaaaagau
uaauaauucuuuauuaaauuauuauaagguaacuugauaaugacaguaua
uuucaauaaauuuaagauaaaugaauuaaauuuuuaacuauggauuguca
ugauaagaaauaguuaauuauauauacuugauaaaaauaaaauaauuuua
accguaccuauaccgcaucaggugucuuuguaucauaacaaauauuuuaa
auuaaaguaaguaagggaauucggcaaauuagaucuguaacuuugggaua
aagauuggcucuagcaugcuagaacuuuuacuauguaaggaaucugacug
uuuauuaaaaacauagcuuuuuguauuuacaagaagugaauucugcccag
ugcauuuguuaaaguuguguaagcgaauguaaacggcgggaguacuauga
cucucuuaagguagccaaaugccucgucauuuaauuggugacgcgcauga
auggagcaacgagauuccuacugucccuacuuacaauuuugugaaaccac
gagacaagggaacgggcuuguuauuuaucagcggggaaagaagacccugu
ugagcuugacuuuaguauguuuuaauaaauauucgaauauuuauuuauua
gaauauauggggaguuuggcuggggcgguacagcuguuaaaaaguaacac
agcuguccuaagguagaugaaugauggaugguaaccaucaguuuauuaua
agggaauaaaucugcuuuacuuuaugcauaugacuguauuuaguagggaa
accuuggccuagcgaucccaauuacauucauuauguauugggugauugaa
aaguuaccacagggauaacuggcuuguagcaggcaagcgaucauagcgac
ucugcuuuuugauucuucgaugucgucucuucugaucaucguaguguaua
uguuacgaaguguuggauuguucacccgguaaugaggaacgugagauggg
uuuagaccgucgugagacagguuaguuuuacccuacuguaaguauuuuug
agugaacuuugauaguacgagaggaacucuaagugaugaccacugguagu
gcgauuaacuauuaaguuauguugcuuagcuacgucguuucgauuaaggc
ugaaagccucuuaagccugaagcguagcucaaagauacauuuaggagaau
acuacucuuuuaagcagaacuguaagaaugaagguguaugccgacauuuu
gagguuacugcuu
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Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6rm3 Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome.
Resolution3.4 Å
Binding residue
(original residue number in PDB)
G16 K35 I44 W51 R56
Binding residue
(residue number reindexed from 1)
G16 K35 I44 W51 R56
External links