Structure of PDB 8i9p Chain LN Binding Site BS01 |
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| >8i9p Chain C1 (length=1307)
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uugaccucggaucagguaggaggacccgcugaacuuaagcauaucaauaa
gcggaggaaaagaaaccaacagggauugcccuaguaacggcgagugaagc
ggcaacagcucaaauuugaaagcuggcuucggcccgcguuguaauuugga
gaggaugcuuugggcgaggcuccuucugaguucccuggaacgggacgcca
cagagggugagagccccguauaguuggaagccaagccuguguaaagcucc
uucgacgagucgaguaguuugggaaugcugcucaaaaugggagguaaauu
ucuucuaaagcuaaauaccggccagagaccgauagcgcacaaguagagug
aucgaaagaugaaaagcacuuugaaaagaggguuaaauagcacgugaaau
uguugaaagggaagcgcuugugaccagacuugcgcccggcggaucauccg
guguucucaccggugcacuccgccgggcucaggccagcaucgguucuggc
ggggggauaaaggcccagggaauguggcuccuccgggaguguuauagccc
uggguguaauacccucgccgggaccgaggaccgcgcucugcaaggaugcu
ggcguaauggucaccagcgacccgucuugaaacacggaccaaggagucaa
gguuuugcgcgaguguuuggguguaaaacccgcacgcguaaaggugagag
cuucggcgcaucaucgaccgauccugauguauucggauggauuugaguag
gagcguuaagccuuggacccgaaagauggugaacaaccaucuaguagcug
guuaccgccgaaguuucccucaggauagcagugucgaccuucaguuuuau
gagguaaagcgaaugaacuuuaaauauguaagaagcccuuguuacuuaac
ugaacgugggcauucgaauguaucgacacuagugggccauuuuugguaag
cagaacuggcgaugcgggaugaaccgaacgcgggguuaaggugccggagu
ggacgcucaucagacuggcgcucaagcgucccacccauaccccgcccuca
ggguagaaacgaugcccugaggaguaggcggccguggaggucagugacga
agccuagggcgugagcccgggucgaacggccucuagugcagaucuuggug
guaguagcaaauaucuagcgaaaccacagacccgcacguagacguauaag
aauaggcuccggccucguauccuagcaggcgauuccuccgccggccucga
aguggccgucgguaauucgcguauugcaaagacacgcgcgggaucaaauc
agauuuc |
........................<<<<<<.....<......>......>
>>>>.>.........<<....>>..<<<<<......<<.....>>.....
>>>>>..<<<..<<.......<<.<<<....>>>.>>.......>>....
<<<<<.<<<<<<<<<..<<<<<<..<<....<<<<......>>>>.((..
....<<<.....))>>>....>>..>>>.>>>..>>>>....>>>>>>>>
.>>........<<<<<<<........>>>>>>>.....<<<<<<......
>>>>>>..>>>..................................<<...
.>>...............<<<<....>>>>....................
..............<<<<.<<<<<<<....<<.<<<<<<<<<<.<<.<<<
<<<....>>>>>>>>...>>>>>>>>>>.>>.<<<<<<<.<<<<<<<<<<
<<<<<.......<<<<<<<<......<<<<<....>>>>>.......>>>
>>>>>......>>>>>>>>>>>>>>>........<<...>>.....>>>>
>>>....>>>>>>>.>>>>..<<<<.<....>.>>>><<<<<<...<<<<
<<<<<.<<<<..<<<...<<<<.....>>>>...>>>.....<<<<<..<
<....>>...>>>>>.<<<<<<<<...<<....>>...>>>.>>>.>>..
..>>>>.>>>>>>>>>.<<.<..<<<<<<<.....>>>>>>...>..>.>
>...<<<<<....<.<<<....>>>.><<<<<<<<<<....<<.<<<<<<
......<<<........>>.>......>>>>...<<<..<<<<.<.....
.>>>>>.>>.>.....>>>>..>>>>>>>>.>>..<<<<.<<<<<.....
>>>>>.>>>>....<<<......>>>...<<<<<<<...<<<(((.....
<<<<<<.....<<...))).>>...>>>>>>.>>>...>>>>>>><<<<<
<<<<.........>>>>>>>>>....>>>>>.<.<<<<<<<<.<<.....
.<<<<.<<<<....>>>>>>>>...>>>>>>>>>>..>.....>>>>>><
<.....<<.........>>....>>.....<<<<<.<<.......<<...
....<<<....>>>....>>........<<<<.....<<<.<<<<<....
...>>>>>.>>>....>>>>..............>>.>>>>>...<<<<<
.>>>>>. |
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| PDB | 8i9p Mechanism of 5S RNP recruitment and helicase-surveilled rRNA maturation during pre-60S biogenesis. |
| Resolution | 3.0 Å |
Binding residue
(original residue number in PDB) | G2 K5 E8 K12 K14 Q15 S40 R41 R44 K47 R49 R50 L51 K54 A55 K56 Q57 R68 G69 Q91 K93 Y94 Q95 R96 S97 L98 N112 N117 W120 Q123 N138 K140 R144 R147 W150 P154 V155 H156 K157 H158 C161 R162 L164 S166 K170 S171 R172 L174 K176 G177 H178 R179 F180 N181 K182 R187 R188 K189 W191 K192 R193 H194 W200 R201 Y202 R203 |
Binding residue
(residue number reindexed from 1) | G1 K4 E7 K11 K13 Q14 S39 R40 R43 K46 R48 R49 L50 K53 A54 K55 Q56 R67 G68 Q71 K73 Y74 Q75 R76 S77 L78 N92 N97 W100 Q103 N118 K120 R124 R127 W130 P134 V135 H136 K137 H138 C141 R142 L144 S146 K150 S151 R152 L154 K156 G157 H158 R159 F160 N161 K162 R167 R168 K169 W171 K172 R173 H174 W180 R181 Y182 R183 |
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| Enzyme Commision number |
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