Structure of PDB 8cgj Chain L Binding Site BS01 |
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| >8cgj Chain A (length=1130)
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aauugaagaguuugaucauggcucagauugaacgcuggcggcaggccuaa
cacaugcaagucgaacgguaacaggaagaagcuugcuucuuugcugacga
guggcggacgggugaguaaugucugggaaacugccugauggagggggaua
acuacuggaaacgguagcuaauaccgcauaacgucgcaagaccaaagagg
gcucuugccaucggaugugcccagaugggauuagcuaguaggugggguaa
cggcucaccuaggcgacgaucccuagcuggucugagaggaugaccagcca
cacuggaacugagacacgguccagacuccuacgggaggcagcagugggga
auauugcacaaugggcgcaagccugaugcagccaugccgcguguaugaag
aagcccuucggguuguaaaguacuuucagcggggaggaagggaguaaagu
uaauaccuuugcucauugacguuacccgcagaagaagcaccggcuaacuc
cgugccagcagccgcgguaauacggagggugcaagcguuaaucggaauua
cugggcguaaagcgcacgcaggcgguuuguuaagucagaugugaaauccc
cgggcucaaccugggaacugcaucugauacuggcaagcuugagucucgua
gagggggguagaauuccagguguagcggugaaaugcguagagaucuggag
gaauaccgguggcgaaggcggcccccuggacgaagacugacgcucaggug
cgaaagcguggggagcaaacaggauuagauacccugguaguccacgccgu
aaacgaugucgacuuggagguugugcgcguggcuuccggagcuaacgcgu
uaagucgaccgccuggggaguacggccgcaagguuaaaacucaaaugaau
ugacgggggcccgcagucgucagcucguguugugaaauguuggguuaagu
cccgcaacgagcgcaacaugacgucaacccgggccuuguacacaccgccc
gucacaccaugggaguggguugcaaaagaaguagguagcuuaaccuucgg
gagggcgcuuaccacuuugugauucaugacuggggugaagucguaacaag
guaaccguaggggaaccugcgguuggauca |
.......<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<.....
<<<.<<<..<<<..<<.<<..<<<<<<..<.......>.>>>.>>>>>..
>>>>>......<<.......<<<<<<<..<<...<<<<<<<.<.<<....
.<<<<<......>>>>>......>>.>.....<<<....>>>....<<<<
..>>>>.>>>>>>>..>>.>>>>>>><<<....<<<..<<<<<<<.....
....>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>
>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>....
.....<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<....
....<<....>>.......>>>>...<.<<<<<......<.<<<<<<<<.
......>>>>>>>>.>........>>>>>....>..<<<<<(((...<<<
<<.....<<.)))>>.......>>>>>>>>>>..>>>>>>>>>.......
...<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<
<<<<.....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<.
..<<<<<<<....<<<<<<<<...<<<......>>>......>>>>>>>>
...........<<....>>.>>>>>>>..>>>>.>>>>...>>>...>>>
>....<<<<<<...<<...<<<<.........>>>>...>>>>>>>>...
.......<<<<<<.<<<<<<<<<<<..>>>>>>>>>>>..<<..))>>..
...>>>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]
<<<<<.<<<<<<<.........<<<<<<<<<....>>>..<<<<......
>>>>..>>>>>>.................>>>>>>>>>>.>>....<..<
<.<.<<<<.<<<..<<<<<<<<<<<<....<<<<<<.<<<<..<<....>
>.>>>>>>>>>>...>>>>>>>>>>>>..>>>.>>>>..>.>>...>...
..<<<<<<<<<....>>>>>>>>>...... |
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| PDB | 8cgj Structural conservation of antibiotic interaction with ribosomes. |
| Resolution | 1.79 Å |
Binding residue
(original residue number in PDB) | A2 N5 Q6 L7 R9 R12 V21 A26 C27 P28 Q29 K30 R31 K43 K44 N46 S47 A48 R50 K51 T58 Y66 G68 G69 E70 L81 R83 G84 R86 K88 X89 P91 R94 R110 K111 Q112 A113 R114 S115 K116 V119 K120 R121 |
Binding residue
(residue number reindexed from 1) | A1 N4 Q5 L6 R8 R11 V13 A18 C19 P20 Q21 K22 R23 K35 K36 N38 S39 A40 R42 K43 T50 Y58 G60 G61 E62 L73 R75 G76 R78 K80 X81 P83 R86 R102 K103 Q104 A105 R106 S107 K108 V111 K112 R113 |
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| Enzyme Commision number |
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