Structure of PDB 7z1l Chain L Binding Site BS01
Receptor Information
>7z1l Chain L (length=45) Species:
580240
(Saccharomyces cerevisiae W303) [
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TLKYICAECSSKLSLSRTDAVRCKDCGHRILLKARTKRLVQFEAR
Ligand information
Ligand ID
ZN
InChI
InChI=1S/Zn/q+2
InChIKey
PTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
Formula
Zn
Name
ZINC ION
ChEMBL
CHEMBL1236970
DrugBank
DB14532
ZINC
PDB chain
7z1l Chain L Residue 101 [
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Receptor-Ligand Complex Structure
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PDB
7z1l
Architecture of the yeast Pol III pre-termination complex and pausing mechanism on poly(dT) termination signals.
Resolution
2.8 Å
Binding residue
(original residue number in PDB)
C31 C34 C48
Binding residue
(residue number reindexed from 1)
C6 C9 C23
Annotation score
1
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0001054
RNA polymerase I activity
GO:0001055
RNA polymerase II activity
GO:0001056
RNA polymerase III activity
GO:0003677
DNA binding
GO:0003899
DNA-directed 5'-3' RNA polymerase activity
GO:0003968
RNA-dependent RNA polymerase activity
GO:0008270
zinc ion binding
GO:0046872
metal ion binding
Biological Process
GO:0001172
RNA-templated transcription
GO:0006351
DNA-templated transcription
GO:0006360
transcription by RNA polymerase I
GO:0006361
transcription initiation at RNA polymerase I promoter
GO:0006362
transcription elongation by RNA polymerase I
GO:0006363
termination of RNA polymerase I transcription
GO:0006366
transcription by RNA polymerase II
GO:0006367
transcription initiation at RNA polymerase II promoter
GO:0006368
transcription elongation by RNA polymerase II
GO:0006383
transcription by RNA polymerase III
GO:0006384
transcription initiation at RNA polymerase III promoter
GO:0006386
termination of RNA polymerase III transcription
GO:0042254
ribosome biogenesis
GO:0042790
nucleolar large rRNA transcription by RNA polymerase I
GO:0042797
tRNA transcription by RNA polymerase III
Cellular Component
GO:0000428
DNA-directed RNA polymerase complex
GO:0005634
nucleus
GO:0005654
nucleoplasm
GO:0005665
RNA polymerase II, core complex
GO:0005666
RNA polymerase III complex
GO:0005730
nucleolus
GO:0005736
RNA polymerase I complex
GO:0005737
cytoplasm
GO:0005777
peroxisome
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:7z1l
,
PDBe:7z1l
,
PDBj:7z1l
PDBsum
7z1l
PubMed
36070694
UniProt
P40422
|RPAB4_YEAST DNA-directed RNA polymerases I, II, and III subunit RPABC4 (Gene Name=RPC10)
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