Structure of PDB 6dcw Chain L Binding Site BS01
Receptor Information
>6dcw Chain L (length=219) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
DIQLTQSPDSLAVSLGERATINCKSSQSVFSRDNNKNYLAWYQHKSGQPP
KLLFFWASSRESGVSDRFSGSGSGTDFTLTIDNLQAEDVALYYCQHYFNT
PHNFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREA
KVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYAC
EVTHQGLSSPVTKSFNRGE
Ligand information
>6dcw Chain T (length=9) Species:
9606
(Homo sapiens) [
Search peptide sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
YKPVDLSKV
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
6dcw
A common antigenic motif recognized by naturally occurring human VH5-51/VL4-1 anti-tau antibodies with distinct functionalities.
Resolution
2.0 Å
Binding residue
(original residue number in PDB)
Y32 F92 H96
Binding residue
(residue number reindexed from 1)
Y38 F98 H102
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003823
antigen binding
Biological Process
GO:0002250
adaptive immune response
GO:0006955
immune response
GO:0016064
immunoglobulin mediated immune response
GO:0050853
B cell receptor signaling pathway
Cellular Component
GO:0005576
extracellular region
GO:0005615
extracellular space
GO:0005886
plasma membrane
GO:0019814
immunoglobulin complex
GO:0070062
extracellular exosome
GO:0071735
IgG immunoglobulin complex
GO:0071738
IgD immunoglobulin complex
GO:0071742
IgE immunoglobulin complex
GO:0071745
IgA immunoglobulin complex
GO:0071753
IgM immunoglobulin complex
GO:0072562
blood microparticle
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:6dcw
,
PDBe:6dcw
,
PDBj:6dcw
PDBsum
6dcw
PubMed
29855358
UniProt
P01834
|IGKC_HUMAN Immunoglobulin kappa constant (Gene Name=IGKC)
[
Back to BioLiP
]