Structure of PDB 2r8s Chain L Binding Site BS01
Receptor Information
>2r8s Chain L (length=214) Species:
10090
(Mus musculus) [
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DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYS
ASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYSSPITFGQ
GTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKV
DNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQG
LSSPVTKSFNRGEC
Ligand information
>2r8s Chain R (length=159) [
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ggaauugcgggaaaggggucaacagccguucaguaccaagucucagggga
aacuuugagauggccuugcaaaggguaugguaauaagcugacggacaugg
uccuaacacgcagccaaguccuaagucaacagaucuucuguugauaugga
ugcaguuca
.....<<<<.<...<<<<<<.....<<<.<<<<.<<...<<<<<<<<<..
..>>>>>>>>>..<<.......>>.....>>......>>>>>>>....>>
>>>>..>.>>>><<...<<<<...<<<<<<<<.....>>>>>>>>..>>>
>...>>...
Receptor-Ligand Complex Structure
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PDB
2r8s
Synthetic antibodies for specific recognition and crystallization of structured RNA
Resolution
1.95 Å
Binding residue
(original residue number in PDB)
S30 L46 Y49 S50 S56 G57 V58 P59 S60 R66 Y92
Binding residue
(residue number reindexed from 1)
S30 L46 Y49 S50 S56 G57 V58 P59 S60 R66 Y92
Binding affinity
PDBbind-CN
: Kd=51nM
External links
PDB
RCSB:2r8s
,
PDBe:2r8s
,
PDBj:2r8s
PDBsum
2r8s
PubMed
18162543
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