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Receptor Information

>2d7f Chain L (length=237) Species: 3824 (Canavalia gladiata) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

ADTIVAVELDTYPNTDIGDPNYPHIGIDIKSVRSKKTAKWNMQNGKVGTA
HIIYNSVGKRLSAVVSYPNGDSATVSYDVDLDNVLPEWVRVGLSASTGLY
KETNTILSWSFTSKLKSNSTHETNALHFMFNQFSKDQKDLILQGDATTGT
DGNLELTRVSSNGSPQGSSVGRALFYAPVHIWESSAVVASFDATFTFLIK
SPDSHPADGIAFFISNIDSSIPSGSTGRLLGLFPDAN

Ligand ID

MMA

InChI

InChI=1S/C7H14O6/c1-12-7-6(11)5(10)4(9)3(2-8)13-7/h3-11H,2H2,1H3/t3-,4-,5+,6+,7+/m1/s1

InChIKey

HOVAGTYPODGVJG-VEIUFWFVSA-N

SMILES

Software	SMILES
CACTVS 3.341	CO[C@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@@H]1O
ACDLabs 10.04	OC1C(O)C(O)C(OC1OC)CO
OpenEye OEToolkits 1.5.0	CO[C@@H]1[C@H]([C@H]([C@@H]([C@H](O1)CO)O)O)O
CACTVS 3.341	CO[CH]1O[CH](CO)[CH](O)[CH](O)[CH]1O
OpenEye OEToolkits 1.5.0	COC1C(C(C(C(O1)CO)O)O)O

Formula

C7 H14 O6

Name

methyl alpha-D-mannopyranoside;
O1-METHYL-MANNOSE;
methyl alpha-D-mannoside;
methyl D-mannoside;
methyl mannoside

PDB chain

2d7f Chain L Residue 2238 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

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Structure summary

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PDB	2d7f Structure of a lectin from Canavalia gladiata seeds: new structural insights for old molecules
Resolution	2.31 Å
Binding residue (original residue number in PDB)	Y12 N14 G98 L99 Y100 A207 D208 G227 R228
Binding residue (residue number reindexed from 1)	Y12 N14 G98 L99 Y100 A207 D208 G227 R228
Annotation score	4

Enzyme Commision number

	Molecular Function
GO:0030246	carbohydrate binding

PDB	RCSB:2d7f, PDBe:2d7f, PDBj:2d7f
PDBsum	2d7f
PubMed	17683532
UniProt	P14894\|CONA_CANGL Concanavalin-A

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Structure of PDB 2d7f Chain L Binding Site BS01