Structure of PDB 1jd2 Chain L Binding Site BS01
Receptor Information
>1jd2 Chain L (length=222) Species:
4932
(Saccharomyces cerevisiae) [
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QFNPYGDNGGTILGIAGEDFAVLAGDTRNITDYSINSRYEPKVFDCGDNI
VMSANGFAADGDALVKRFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGK
RFFPYYVHTIIAGLDEDGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFL
DNQVNFKNQYEPGTNGKVKKPLKYLSVEEVIKLVRDSFTSATERHIQVGD
GLEILIVTKDGVRKEFYELKRD
Ligand information
Ligand ID
MG
InChI
InChI=1S/Mg/q+2
InChIKey
JLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Mg+2]
CACTVS 3.341
[Mg++]
Formula
Mg
Name
MAGNESIUM ION
ChEMBL
DrugBank
DB01378
ZINC
PDB chain
1jd2 Chain L Residue 195 [
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Receptor-Ligand Complex Structure
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PDB
1jd2
Crystal structure of the 20 S proteasome:TMC-95A complex: a non-covalent proteasome inhibitor.
Resolution
3.0 Å
Binding residue
(original residue number in PDB)
T163 H166 V169
Binding residue
(residue number reindexed from 1)
T192 H195 V198
Annotation score
4
Enzymatic activity
Enzyme Commision number
3.4.99.46
: Transferred entry: 3.4.25.1.
Gene Ontology
Molecular Function
GO:0003674
molecular_function
GO:0005515
protein binding
Biological Process
GO:0010499
proteasomal ubiquitin-independent protein catabolic process
GO:0043161
proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0051603
proteolysis involved in protein catabolic process
Cellular Component
GO:0000502
proteasome complex
GO:0005634
nucleus
GO:0005737
cytoplasm
GO:0005829
cytosol
GO:0005839
proteasome core complex
GO:0019774
proteasome core complex, beta-subunit complex
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:1jd2
,
PDBe:1jd2
,
PDBj:1jd2
PDBsum
1jd2
PubMed
11493007
UniProt
P23724
|PSB6_YEAST Proteasome subunit beta type-6 (Gene Name=PRE7)
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