Structure of PDB 1f4y Chain L Binding Site BS01

Receptor Information
>1f4y Chain L (length=210) Species: 10090 (Mus musculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
QAVVTQESALTTSPGETVTLTCRSSTGTVTTSNYANWVQEKPDHLFTGLI
GATNNRAAGVPVRFSGSLIGGKAALTITGAQTEDEAIYFCALWYSGHWVF
GGGTKLTVLGQPKSSPSVTLFPPSSEELETNKATLVCTITDFYPGVVTVD
WKVDGTPVTQGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTH
EGHTVEKSLS
Ligand information
Ligand IDZD0
InChIInChI=1S/C11H21NO7/c1-5-7(12-10(17)6(14)3-4-13)8(15)9(16)11(18-2)19-5/h5-9,11,13-16H,3-4H2,1-2H3,(H,12,17)/t5-,6-,7-,8+,9+,11+/m1/s1
InChIKeyASFHRCHAPWVLRF-CWJAVHARSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.7.6CC1C(C(C(C(O1)OC)O)O)NC(=O)C(CCO)O
CACTVS 3.370CO[C@H]1O[C@H](C)[C@@H](NC(=O)[C@H](O)CCO)[C@H](O)[C@@H]1O
ACDLabs 12.01O=C(NC1C(OC(OC)C(O)C1O)C)C(O)CCO
OpenEye OEToolkits 1.7.6C[C@@H]1[C@H]([C@@H]([C@@H]([C@H](O1)OC)O)O)NC(=O)[C@@H](CCO)O
CACTVS 3.370CO[CH]1O[CH](C)[CH](NC(=O)[CH](O)CCO)[CH](O)[CH]1O
FormulaC11 H21 N O7
Namemethyl 4,6-dideoxy-4-{[(2R)-2,4-dihydroxybutanoyl]amino}-alpha-D-mannopyranoside
ChEMBL
DrugBank
ZINC
PDB chain1f4y Chain A Residue 1 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB1f4y Crystal structure of an anti-carbohydrate antibody directed against Vibrio cholerae O1 in complex with antigen: molecular basis for serotype specificity.
Resolution2.8 Å
Binding residue
(original residue number in PDB)		W93 S95
Binding residue
(residue number reindexed from 1)		W93 S95
Annotation score1
External links