Structure of PDB 8r57 Chain K Binding Site BS01

Receptor Information

>8r57 Chain K (length=83) Species: 4565 (Triticum aestivum)

MIISKKNRNEICKYLFQEGVLYAKKDYNLAKHPQIDVPNLQVIKLMQSFK
SKEYVRETFSWQHYYWYLTNDGIEFLRNFLNLP

Ligand information

>8r57 Chain A (length=458)

ggcaccaccaggcguggagccugcggcuuaauuugacucaacacggggaa
acuuaccagguccagacauagcaaggauugacagacugagagcucuuucu
ugauucuaugggugguggugcauggccguucuuaguugguuaauuccguu
aacgaacgagaccucagccugcuaacuagcuaugcggagccaucccuccg
cagcuagcuucuuagagggacuaucgccguuuaggcgacggaaguuugag
gcaauaacaggucugugaugcccuuagauguucugggccgcacgcgcgcu
acacugauguauucaacgaguauauagccuuggccgacaggcccggguaa
ucuugggaaauuucaucgugauggggauagaucauugcaauuguuggucu
ucaacgaggaaugccuaguaagcgcgagucaucagcucgcguugacuacg
ucccugcc

<<<<..<<.<<<<<<..<<<.<<<<<.......<<........>>.....
.....<<<<<......<<<<<........<<.<<<........>>>.>>.
.....>>>>>...<<.<<<..<<<<<<<<<....<<<<<......>>>..
.....>>....<<<<<.<<..<<<<..<<<<.<<<<<<<......>>>>>
>>...>>>>..>>>>.>>.....<<<<<.....>>>>>........>>>>
>....>>>.>>>...>.>>>>>>>.......>>>>>....>.>>>>.>>>
.....<<<<.<.......<<.......<<<.<<<<....>>>>.>>>...
.>>........>.>>>>...........<<<<<<..........>>>>>>
..........>>>>>>....<<<<<<<<.......>>>>>>>>......>
>...>>>>

Receptor-Ligand Complex Structure

Structure summary

• PDB: 8r57 High-Resolution Structure and Internal Mobility of a Plant 40S Ribosomal Subunit.
• Resolution: 2.55 Å
• Binding residue (original residue number in PDB): M1 I2 I3 K25 Y27 L40 K44 Q47 S48 S51 K52 F59 Y64
• Binding residue (residue number reindexed from 1): M1 I2 I3 K25 Y27 L40 K44 Q47 S48 S51 K52 F59 Y64

Gene Ontology

Molecular Function

• GO:0003723 RNA binding
• GO:0003735 structural constituent of ribosome

Cellular Component

• GO:0005737 cytoplasm
• GO:0022627 cytosolic small ribosomal subunit

External links

• PDB: RCSB:8r57, PDBe:8r57, PDBj:8r57
• PDBsum: 8r57
• PubMed: 38139282
• UniProt: W5AUH7