Structure of PDB 8h7g Chain K Binding Site BS01
Receptor Information
>8h7g Chain K (length=352) Species:
9606
(Homo sapiens) [
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PRESVRLMAESTGLELSDEVAALLAEDVCYRLREATQNSSQFMKHTKRRK
LTVEDFNRALRWSSVEAVCGYGSQEALPMRPYFPEDREVNLVELALATNI
PKGCAETAVRVHVSYLSVPSAVSSLTDDLLKYYHQVTRAVLGDDPQLMKV
ALQDLQTNSKIGALLPYFVYVVSGVKSVSHDLEQLHRLLQVARSLFRNPH
LCLGPYVRCLVGSVLYCVLEHWTLRDGAALLLSHIFWTHGDLVSGLYQHI
LLSLQKILADPVRPLCCHYGAVVGLHALGWKAVERVLYPHLSTYWTNLQA
VLDDYSVSNAQVKADGHKVYGAILVAVERLLLLFQESSSGGGAEPSFGSG
LP
Ligand information
>8h7g Chain X (length=19) Species:
9606
(Homo sapiens) [
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AAAAAAAAAAAAAAAAAAA
Receptor-Ligand Complex Structure
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PDB
8h7g
Cryo-EM structure of human SAGA transcriptional coactivator complex.
Resolution
3.7 Å
Binding residue
(original residue number in PDB)
W276 Q287 W319 K320 A321 R324
Binding residue
(residue number reindexed from 1)
W237 Q248 W280 K281 A282 R285
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0003713
transcription coactivator activity
GO:0005515
protein binding
GO:0016251
RNA polymerase II general transcription initiation factor activity
GO:0046982
protein heterodimerization activity
Biological Process
GO:0006282
regulation of DNA repair
GO:0006338
chromatin remodeling
GO:0006355
regulation of DNA-templated transcription
GO:0006357
regulation of transcription by RNA polymerase II
GO:0006367
transcription initiation at RNA polymerase II promoter
GO:0043484
regulation of RNA splicing
GO:0045893
positive regulation of DNA-templated transcription
GO:0051123
RNA polymerase II preinitiation complex assembly
GO:1904672
regulation of somatic stem cell population maintenance
Cellular Component
GO:0000118
histone deacetylase complex
GO:0000124
SAGA complex
GO:0005634
nucleus
GO:0005654
nucleoplasm
GO:0005669
transcription factor TFIID complex
GO:0046695
SLIK (SAGA-like) complex
GO:0070062
extracellular exosome
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:8h7g
,
PDBe:8h7g
,
PDBj:8h7g
PDBsum
8h7g
PubMed
36414614
UniProt
Q9Y6J9
|TAF6L_HUMAN TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L (Gene Name=TAF6L)
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