Structure of PDB 7zbh Chain K Binding Site BS01
Receptor Information
>7zbh Chain K (length=368) Species:
224326
(Borreliella burgdorferi B31) [
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ITFKDVAGQEEVKQELREVVEFLKNPKKFEKIGAKIPKGVLLVGSPGTGK
TLLAKAVAGEAGVSFFHMSGSDFVMFVGVGASRVRDLFDNARKNSPCIIF
IDELDAVGRHDEREQTLNQLLVEMDGVIVMAATNRPDVLDSALLRPGRFD
RQVTVSLPDIKEREAILNIHSLKTKLSKDINLQVIARATPGASGADLANL
INEGALIAARNKDMEEARDKILTDRQKLETAYHEAGHALLHYYLEHADPL
HKVTIISINKHQILDKIKICYGGYASEQINLGVTTAGVQNDLMQATSLAK
KMVTEWGMGEEVGPIFLVAYSENTADKVDREVKRILEECLKEASDILLKH
KDQLVKLAKELVLKETLT
Ligand information
Ligand ID
ADP
InChI
InChI=1S/C10H15N5O10P2/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(24-10)1-23-27(21,22)25-26(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKey
XTWYTFMLZFPYCI-KQYNXXCUSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O
ACDLabs 10.04
O=P(O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
CACTVS 3.341
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)O)O)O)N
Formula
C10 H15 N5 O10 P2
Name
ADENOSINE-5'-DIPHOSPHATE
ChEMBL
CHEMBL14830
DrugBank
DB16833
ZINC
ZINC000012360703
PDB chain
7zbh Chain K Residue 701 [
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Receptor-Ligand Complex Structure
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PDB
7zbh
ATP-dependent zinc metalloprotease FtsH (BB0789) from Borrelia burgdorferi
Resolution
3.3 Å
Binding residue
(original residue number in PDB)
V174 S213 P214 G215 G217 K218 T219 L220 I350 H354 G378 A379
Binding residue
(residue number reindexed from 1)
V6 S45 P46 G47 G49 K50 T51 L52 I166 H170 G194 A195
Annotation score
5
Enzymatic activity
Enzyme Commision number
3.4.24.-
Gene Ontology
Molecular Function
GO:0004176
ATP-dependent peptidase activity
GO:0004222
metalloendopeptidase activity
GO:0005524
ATP binding
GO:0016887
ATP hydrolysis activity
Biological Process
GO:0006508
proteolysis
Cellular Component
GO:0016020
membrane
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:7zbh
,
PDBe:7zbh
,
PDBj:7zbh
PDBsum
7zbh
PubMed
UniProt
O51729
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