Structure of PDB 7ud5 Chain K Binding Site BS01
Receptor Information
>7ud5 Chain K (length=175) Species:
9606
(Homo sapiens) [
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ARAEVHLRKSAFDMFNFLASKHRQLPMPMRFRHLKKTSKEAVGVYRSPIH
GRGLFCKRNIDAGEMVIEYAGNVIRSIQTDKREKYYDSKGIGCYMFRIDD
SEVVDATMHGNAARFINHSCEPNCYSRVINIDGQKHIVIFAMRKIYRGEE
LTYDYKFPIKLPCNCGAKKCRKFLN
Ligand information
Ligand ID
SAH
InChI
InChI=1S/C14H20N6O5S/c15-6(14(23)24)1-2-26-3-7-9(21)10(22)13(25-7)20-5-19-8-11(16)17-4-18-12(8)20/h4-7,9-10,13,21-22H,1-3,15H2,(H,23,24)(H2,16,17,18)/t6-,7+,9+,10+,13+/m0/s1
InChIKey
ZJUKTBDSGOFHSH-WFMPWKQPSA-N
SMILES
Software
SMILES
CACTVS 3.341
N[CH](CCSC[CH]1O[CH]([CH](O)[CH]1O)n2cnc3c(N)ncnc23)C(O)=O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)CSCCC(C(=O)O)N)O)O)N
CACTVS 3.341
N[C@@H](CCSC[C@H]1O[C@H]([C@H](O)[C@@H]1O)n2cnc3c(N)ncnc23)C(O)=O
ACDLabs 10.04
O=C(O)C(N)CCSCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CSCC[C@@H](C(=O)O)N)O)O)N
Formula
C14 H20 N6 O5 S
Name
S-ADENOSYL-L-HOMOCYSTEINE
ChEMBL
CHEMBL418052
DrugBank
DB01752
ZINC
ZINC000004228232
PDB chain
7ud5 Chain K Residue 4001 [
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Receptor-Ligand Complex Structure
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PDB
7ud5
Multistate structures of the MLL1-WRAD complex bound to H2B-ubiquitinated nucleosome.
Resolution
4.25 Å
Binding residue
(original residue number in PDB)
H3839 R3841 C3882 Y3883 R3903 H3907 Y3944 L3955 P3956
Binding residue
(residue number reindexed from 1)
H50 R52 C93 Y94 R114 H118 Y155 L161 P162
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:7ud5
,
PDBe:7ud5
,
PDBj:7ud5
PDBsum
7ud5
PubMed
36095189
UniProt
B4DIJ7
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