Structure of PDB 7qiy Chain K Binding Site BS01

Receptor Information
>7qiy Chain K (length=140) Species: 4081 (Solanum lycopersicum) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PARSVKDVSPHDFVKAYAAHLKRSGKLELPEWTDIVKTGKLKELAPYDPD
WYYIRAASMARKIYLRGGIGVGGFRRIYGGNQRNGSRPRHFCKSSGSVAR
HILQQLQTMNIIDFDPKGGRRITSNGQRDLDQVAGRISAA
Ligand information
>7qiy Chain 2 (length=474) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
uugacggaagggcaccaccaggaguggagccugcggcuuaauuugacuca
acacggggaaacuuaccagguccagacauaguagacugagagcucuuucu
augggugguggugcauggccguucuuaguugguauuugucugguuaauuc
cguuaacgaacgagaccucagccugcuaacuagcuaugcggagguucccu
ucgcggccagcuucuuagagggacuacggccuuuuaggccgcggaaguuu
gaggcaauaacaggucugugaugcccuuagauguucugggccgcacgcgc
gcuacacugauguauucaacgagcuuauagccuuggccgacaggcccggg
uaaucuuugaaauuucaucgugauggggauagaucauugcaauuguuggu
cuucaacgaggaauuccuaguaagcgcgagucaucagcucgcguugacua
cgucccugcccuuuguacacaccg
.<<<<<.<<<<<<<..<<.<<<<<<..<<<.<<<<........<<.....
...>>..........<<<<<......<<<<<.<<........>>....>>
>>>...<<.<<<..<<.<<<<<<....<<<.<<.......<<<......>
>>...>>.>>>....<<<<<.<<..<<<<..<<<<.<<<<<<<<...>>>
>>>>>...>>>>..>>>>.>>.....<<<<<.....>>>>>........>
>>>>....>>>.>>>.....>>>>>>>.......>>>>>......>>>>.
>>>.....<<<<.<.......<<.......<<<.<<<<....>>>>.>>>
....>>.......>.>>>>...........<<<<<<..........>>>>
>>..........>>>>>>....<<<<<<<<.......>>>>>>>>.....
.>>...>>>>>>>>>>.>>.....
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7qiy Cryo-EM structure and rRNA modification sites of a plant ribosome.
Resolution2.58 Å
Binding residue
(original residue number in PDB)		A4 P12 H13 V16 V38 T40 K42 K44 E45 P48 Y49 R57 S60 R63 R68 G70 G72 V73 G74 R78 N83 Q84 R85 G87 S88 R89 P90 R91 H92 F93 S97 G98 S99 R102 Q106 G121 R122 S126 Q129 R130 D133
Binding residue
(residue number reindexed from 1)		A2 P10 H11 V14 V36 T38 K40 K42 E43 P46 Y47 R55 S58 R61 R66 G68 G70 V71 G72 R76 N81 Q82 R83 G85 S86 R87 P88 R89 H90 F91 S95 G96 S97 R100 Q104 G119 R120 S124 Q127 R128 D131
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
Biological Process
GO:0000028 ribosomal small subunit assembly
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7qiy, PDBe:7qiy, PDBj:7qiy
PDBsum7qiy
PubMed35643637
UniProtA0A3Q7FTS1

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