Structure of PDB 5y02 Chain K Binding Site BS01

Receptor Information
>5y02 Chain K (length=103) Species: 78168 (Passiflora edulis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
EIVRHIVFNRYKSQLSQKQIDQIIADYGNLQNIAPEMKEWKWGTDLGPAV
EDRADGFTHAYESTFHSVADFLNFFYSPPALEFAKEFFPACEKIVVLNYI
INE
Ligand information
Ligand IDMXN
InChIInChI=1S/C8H7NO/c9-6-8(10)7-4-2-1-3-5-7/h1-5,8,10H/t8-/m0/s1
InChIKeyNNICRUQPODTGRU-QMMMGPOBSA-N
SMILES
SoftwareSMILES
CACTVS 3.341O[CH](C#N)c1ccccc1
CACTVS 3.341O[C@@H](C#N)c1ccccc1
OpenEye OEToolkits 1.5.0c1ccc(cc1)C(C#N)O
ACDLabs 10.04N#CC(O)c1ccccc1
OpenEye OEToolkits 1.5.0c1ccc(cc1)[C@H](C#N)O
FormulaC8 H7 N O
Name(2R)-hydroxy(phenyl)ethanenitrile;
(R)-mandelonitrile
ChEMBL
DrugBank
ZINCZINC000008100870
PDB chain5y02 Chain K Residue 201 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB5y02 The crystal structure and catalytic mechanism of hydroxynitrile lyase from passion fruit, Passiflora edulis
Resolution1.8 Å
Binding residue
(original residue number in PDB)
H8 Y30 F78 A83 F86 A87
Binding residue
(residue number reindexed from 1)
H5 Y27 F75 A80 F83 A84
Annotation score1
Enzymatic activity
Enzyme Commision number ?
External links