Structure of PDB 5ds0 Chain K Binding Site BS01

Receptor Information
>5ds0 Chain K (length=356) Species: 1198115 (Thaumarchaeota archaeon SCGC AB-539-E09) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SNADKSMELMKTLMEAFGPSGFEREVNAICKEYMEPYADEVVVDKLGSVT
FIAKGNDRPRILMAGHTDEVGFIVSSISKEGYLTFNTLGGWWSQVLLGQR
VVVRTCKGMVHGIIASKPPHILPPDERKKIVEARDMFIDIGATSEEEAEE
SGVKVGDPIVPWSPFSVIQNGRVAMGKAFDDRIGAFVLMEAIRRMKDQGI
EHPNTVYGSATVQEEVGLRGAQTTAHVVDPDVALVLEVDIAGDVPPHEAL
TKMGKGPGLVTYDRSMIPNQPLKEFVINVAKQAQIPLQLSQMSGGGTDAG
RIHMNRAGCPSVVITIPTRHIHSHVGLLSLKDTENAIRLVIELIKRLDLE
TVEGFT
Ligand information
Ligand IDCO
InChIInChI=1S/Co/q+2
InChIKeyXLJKHNWPARRRJB-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Co+2]
CACTVS 3.341[Co++]
FormulaCo
NameCOBALT (II) ION
ChEMBL
DrugBankDB14205
ZINC
PDB chain5ds0 Chain K Residue 401 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB5ds0 Crystal structure of TET aminopeptidase from marine sediment archaeon Thaumarchaeota archaeon SCGC AB-539-E09
Resolution2.8 Å
Binding residue
(original residue number in PDB)		D180 E215 H325
Binding residue
(residue number reindexed from 1)		D180 E215 H322
Annotation score3
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0004177 aminopeptidase activity
GO:0046872 metal ion binding
Biological Process
GO:0006508 proteolysis

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:5ds0, PDBe:5ds0, PDBj:5ds0
PDBsum5ds0
PubMed
UniProtM7T295

[Back to BioLiP]