Structure of PDB 2nxh Chain K Binding Site BS01
Receptor Information
>2nxh Chain K (length=262) Species:
63363
(Aquifex aeolicus) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
KFLVIAGPNAIESEELLLKVGEEIKRLSEKFKEVEFVFKSSFDKANRSSI
HSFRGHGLEYGVKALRKVKEEFGLKITTDIHESWQAEPVAEVADIIQIPA
FLCRQTDLLLAAAKTGRAVNVKKGQFLAPWDTKNVVEKLKFGGAKEIYLT
ERGTTFGYNNLVVDFRSLPIMKQWAKVIYDATHSVQLPGGLGDKSGGMRE
FIFPLIRAAVAVGCDGVFMETHPEPEKALSDAPTALPLSQLEGIIEAILE
IREVASKYYETI
Ligand information
Ligand ID
PO4
InChI
InChI=1S/H3O4P/c1-5(2,3)4/h(H3,1,2,3,4)/p-3
InChIKey
NBIIXXVUZAFLBC-UHFFFAOYSA-K
SMILES
Software
SMILES
CACTVS 3.341
[O-][P]([O-])([O-])=O
ACDLabs 10.04
[O-]P([O-])([O-])=O
OpenEye OEToolkits 1.5.0
[O-]P(=O)([O-])[O-]
Formula
O4 P
Name
PHOSPHATE ION
ChEMBL
DrugBank
DB14523
ZINC
PDB chain
2nxh Chain K Residue 1290 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
2nxh
Structural and Mechanistic Changes along an Engineered Path from Metallo to Nonmetallo 3-Deoxy-d-manno-octulosonate 8-Phosphate Synthases.
Resolution
2.11 Å
Binding residue
(original residue number in PDB)
R3049 S3050 K3196 S3197
Binding residue
(residue number reindexed from 1)
R47 S48 K194 S195
Annotation score
1
Enzymatic activity
Enzyme Commision number
2.5.1.55
: 3-deoxy-8-phosphooctulonate synthase.
Gene Ontology
Molecular Function
GO:0008676
3-deoxy-8-phosphooctulonate synthase activity
GO:0016740
transferase activity
Biological Process
GO:0009058
biosynthetic process
GO:0009103
lipopolysaccharide biosynthetic process
GO:0019294
keto-3-deoxy-D-manno-octulosonic acid biosynthetic process
GO:0046364
monosaccharide biosynthetic process
Cellular Component
GO:0005737
cytoplasm
GO:0005829
cytosol
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:2nxh
,
PDBe:2nxh
,
PDBj:2nxh
PDBsum
2nxh
PubMed
17381075
UniProt
O66496
|KDSA_AQUAE 2-dehydro-3-deoxyphosphooctonate aldolase (Gene Name=kdsA)
[
Back to BioLiP
]