Structure of PDB 9bct Chain J Binding Site BS01

Receptor Information
>9bct Chain J (length=645) Species: 311400 (Thermococcus kodakarensis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RETFVDDILKEIREIIVQMVPREAGITDVEFEGPELVIYVKNPEAMMKDG
ELIKNLAKVLKKRISVRPDPDILLPPEKAEELIKQLVPPEAEITNISFDP
SVGEVLIEARKPGLVIGKNGETLRLITQKVHWAPRVVRTPPIQSQTIYSI
RSILQTESKDRRKFLRQVGRNIYRKSEYKSRWIRITGLGGFREVGRSALL
VQTDESYVLVDFGVNIAALKDPTKAYPHFDAPEFRYVLDEGLLDAIIITH
AALDHSGMLPYLFRYKLFDGPIYTTPPTRDLMTLLQQDFIEIQHMNGVEP
LYRPKDIKEVIKHTITLDYGEVRDIAPDIRLTLHNAGHILGSSIVHLHIG
NGLHNIAITGDFKFIPTRLFEPAVSRFPRLETLVMESTYGGSNDYQMPRE
EAEKRLIEVIHQTLKRGGKVLIPAMAVGRAQEIMMVLEEYARVGGIEVPI
YLDGMIWEATAIHTAYPEYLSKHIREQIFHEGYNPFLNPIFKSVANSRER
QDIIDSGEPAIIIATSGMLVGGPSVEYFKQLAPDPKNSIIFVSYQAEGTL
GRQVQRGLREIPIVGEDGRTEVINVNMEVHTIDGFSGAADRRELMSYVAR
VRPRPERIITVHGEAHKCLDLSSSIHKKFGISTRAPNNLDAIRLK
Ligand information
>9bct Chain 7 (length=29) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ucuuauuuuuuuucuauuuugcgccgacc
.............................
Receptor-Ligand Complex Structure
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PDB9bct Structural basis of archaeal FttA-dependent transcription termination
Resolution2.5 Å
Binding residue
(original residue number in PDB)		V197 N218 I219 L256 D257 D291 I295 M428 A429 G457 T518 S519 G524 G525 P526 A549
Binding residue
(residue number reindexed from 1)		V194 N215 I216 L253 D254 D288 I292 M425 A426 G454 T515 S516 G521 G522 P523 A546
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003723 RNA binding
GO:0004519 endonuclease activity
GO:0004521 RNA endonuclease activity
GO:0004527 exonuclease activity
GO:0046872 metal ion binding
Biological Process
GO:0006353 DNA-templated transcription termination

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Molecular Function
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Biological Process
External links
PDB RCSB:9bct, PDBe:9bct, PDBj:9bct
PDBsum9bct
PubMed
UniProtQ5JH24|FTTA_THEKO Transcription termination factor FttA (Gene Name=fttA)

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