Structure of PDB 8ip0 Chain J Binding Site BS01

Receptor Information

>8ip0 Chain J (length=467) Species: 1147 (Synechocystis sp. PCC 6714) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

EILTLDFNLAELPSAQHRAGLAGLILMIRELKKWPWFKIRQKEKDVLLSI
ENLDQYGASIQLNLEGLIALFDLAYLSFTEERKSKYFYDVITPQGGFLAG
WDKSDGQIWLRIWRDMFWSIIKGVPATRNPFNNRCGLNLNAGDSFSKDVE
SVWKSLQNAEKTTGQSGAFYLGAMAVNAENVSTDDLIKWQFLLHFWAFVA
QVYCPYILDKDGKRNFNGYVIVIPDIANLEDFCDILPDVLSNRNSKAFGF
RPQESVIDVPEQGALELLNLIKQRIAKKAGSGLLSDLIVGVEVIHAEKQG
NSIKLHSVSYLQPNEESVDDYNAIKNSYYCPWFRRQLLLNLVLASQSWLK
RHPWYGFGDLLSRIPQRWSYFSHDARQLFTQKYAEIVYKIAQGFVLSKLS
SKHPKLEREYNDKKEKVVNEAFLAIEKQAFIDYFVSTLQDEFVDFAQKLF
QDTDEIRSLTLLALSSQ

Ligand information

>8ip0 Chain E (length=15) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

tccatgtttatcacc

Receptor-Ligand Complex Structure

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Structure summary

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PDB	8ip0 Cryo-EM structure of type I-B Cascade bound to a PAM-containing dsDNA target at 3.6 angstrom resolution.
Resolution	3.6 Å
Binding residue (original residue number in PDB)	R88 Y119 R159 F279 F281 N332 C361 W363 Y411 F412
Binding residue (residue number reindexed from 1)	R82 Y88 R128 F248 F250 N301 C330 W332 Y370 F371

Enzymatic activity

Enzyme Commision number

External links

PDB	RCSB:8ip0, PDBe:8ip0, PDBj:8ip0
PDBsum	8ip0
PubMed	38750051
UniProt	A0A068N831

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