Structure of PDB 8ifl Chain J Binding Site BS01

Receptor Information
>8ifl Chain J (length=415) Species: 1393122 (Thermoflavifilum thermophilum) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RNKIFISHATPEDDDFTRWLSLKLIGLGYEVWCDILFLDKGVDFWSTIEK
EIRENTCKFLIVSSTAGNKREGVLKELAVATKVKKHLQDDMFIIPLAIDE
NLSYDDINIEIVRLNAIDFKKSWAKGLQDLLDAFEKQNVPDHSKSNLLYQ
QIFLHDKQAIEKEETYDSNWFPIISFPNELRFHRYDWRLPKQFDVRTLAF
PAIRYKEYLCTFAWEYDFIHQLPKTETYNGQESIRISTSDILSGRYDTDF
IRNYECQRLIVQLINKAFELRMKDKNVREYQMSKTFAYWIEKGKLEKDKF
EKIKLVGKQKNKYWHFGISAAGKLYPSPVLMVSSHIIFTMDGINLIKSKS
IQHSSRRKQGKNWWNDKWREKLLAFIRFLSDDQNAIYLNVGSEEKILISN
KPLKFFGKMSYVTPS
Ligand information
>8ifl Chain L (length=20) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
aaacggcucuaaucuauuag
....................
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB8ifl Target ssDNA activates the NADase activity of prokaryotic SPARTA immune system.
Resolution3.11 Å
Binding residue
(original residue number in PDB)		K196 R209 K211 E260 M287 S288 K354 H358 R361 R362
Binding residue
(residue number reindexed from 1)		K191 R204 K206 E255 M282 S283 K349 H353 R356 R357
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0007165 signal transduction

View graph for
Biological Process
External links
PDB RCSB:8ifl, PDBe:8ifl, PDBj:8ifl
PDBsum8ifl
PubMed37932528
UniProtA0A1I7NFG5

[Back to BioLiP]