Structure of PDB 5tx1 Chain J Binding Site BS01

Receptor Information
>5tx1 Chain J (length=951) Species: 46928 (Human adenovirus 26) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ATPSMMPQWAYMHIAGQDASEYLSPGLVQFARATDTYFSLGNKFRNPTVA
PTHDVTTDRSQRLTLRFVPVDREATTYLYKARFTLAVGDNRVLDMASTYF
DIRGVLDRGPSFKPYSGTAYNSLAPKGAPNPSQWETKEKQGTTGGVQQEK
DVTKTFGVAATGGINITNQGLLLGTDETAENGKKDIYADKTFQPEPQVGE
ENWQENEAFYGGRALKKDTKMKPCYGSFARPTNEKGGQAKFKPVNEGEQP
KDLDIDFAYFDVPGGSPPAGGSGEEYKADIILYTENVNLETPDTHVVYKP
GTSDNSSEINLVQQSMPNRPNYIGFRDNFVGLMYYNSTGNMGVLAGQASQ
LNAVVDLQDRNTELSYQLLLDSLGDRTRYFSMWNSAVDSYDPDVRIIENH
GVEDELPNYCFPLNGTGTNSTYQGVKITNGNDGAEESEWEKDDAISRQNQ
ICKGNVYAMEINLQANLWKSFLYSNVALYLPDSYKYTPANVKLPANTNTY
EYMNGRVVAPSLVDAYINIGARWSLDPMDNVNPFNHPRNAGLRYRSMLLG
NGRYVPFHIQVPQKFFAIKNLLLLPGSYTYEWNFRKDVNMILQSSLGNDL
RVDGASVRFDSVNLYATFFPMAHNTASTLEAMLRNDTHDQSFNDYLSAAN
MLYPIPAKATNVPISIPSRNWAAFRGWSFTRLKTKETPSLGSGFDPYFVY
SGSIPYLDGTFYLNHTFKKVSIMFDSSVSWPGNDRLLTPNEFEIKRSVDG
EGYNVAQCNMTKDWFLVQMLSHYNIGYQGFHVPEGYKDRMYSFFRNFQPM
SRQVVDEINYKDYKAVTLPFQHNNSGFTGYLAPTMRQGQPYPANFPYPLI
GQTAVPSVTQKKFLCDRVMWRIPFSSNFMSMGALTDLGQNMLYANSAHAL
DMTFEVDPMDEPTLLYLLFEVFDVVRVHQPHRGVIEAVYLRTPFSAGNAT
T
Ligand information
>5tx1 Chain 9 (length=26) Species: 46928 (Human adenovirus 26) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
DINFASLAPRHGTRPFMGTWNEIGTS
Receptor-Ligand Complex Structure
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PDB5tx1 Cryo-EM structure of human adenovirus D26 reveals the conservation of structural organization among human adenoviruses.
Resolution3.7 Å
Binding residue
(original residue number in PDB)		D19 V50 A51 P52 H54 V56 L647 R676 F923
Binding residue
(residue number reindexed from 1)		D18 V49 A50 P51 H53 V55 L646 R675 F922
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005198 structural molecule activity
Biological Process
GO:0046718 symbiont entry into host cell
GO:0075521 microtubule-dependent intracellular transport of viral material towards nucleus
Cellular Component
GO:0019028 viral capsid
GO:0039623 T=25 icosahedral viral capsid
GO:0042025 host cell nucleus
GO:0043657 host cell

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5tx1, PDBe:5tx1, PDBj:5tx1
PDBsum5tx1
PubMed28508067
UniProtQ3S8B3

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