Structure of PDB 5tkj Chain J Binding Site BS01

Receptor Information
>5tkj Chain J (length=211) Species: 10090 (Mus musculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
QVQLQQSGTELVWPGTSVTLSCKASGYTFTDYEIHWVKQTPVHGLEWIGA
IVPKTGYTAYNQKFRGKAILTADKSSSTAYMDLRRLTSEDSAVYYCTRLR
NYWYFDVWGTGTTVTVSPASTKGPSVFPLAPGTAALGCLVKDYFPEPVTV
SWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKP
SNTKVDKKVEP
Ligand information
>5tkj Chain L (length=8) Species: 11676 (Human immunodeficiency virus 1) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
AVGIGAVF
Receptor-Ligand Complex Structure
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PDB5tkj Epitope-based vaccine design yields fusion peptide-directed antibodies that neutralize diverse strains of HIV-1.
Resolution2.118 Å
Binding residue
(original residue number in PDB)		E33 A50 L95 N97 Y98 W99
Binding residue
(residue number reindexed from 1)		E33 A50 L99 N101 Y102 W103
External links