Structure of PDB 5lm7 Chain J Binding Site BS01

Receptor Information
>5lm7 Chain J (length=96) Species: 585035 (Escherichia coli S88) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
QNQRIRIRLKAFDHRLIDQATAEIVETAKRTGAQVRGPIPLPTRKERFTV
LISPHVNDQYEIRTHLRLVDIVEPTEKTVDALMRLDLAAGVDVQIS
Ligand information
>5lm7 Chain R (length=29) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
cucuuuaacauuaagcccugaagaagggc
..............<<<<<.....>>>>>
Receptor-Ligand Complex Structure
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PDB5lm7 Structural basis for lambda N-dependent processive transcription antitermination.
Resolution3.35 Å
Binding residue
(original residue number in PDB)		D14 H15
Binding residue
(residue number reindexed from 1)		D13 H14
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0001072 transcription antitermination factor activity, RNA binding
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
GO:0031564 transcription antitermination
GO:0032784 regulation of DNA-templated transcription elongation
GO:0042254 ribosome biogenesis
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0008023 transcription elongation factor complex
GO:0015935 small ribosomal subunit
GO:0022627 cytosolic small ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5lm7, PDBe:5lm7, PDBj:5lm7
PDBsum5lm7
PubMed28452979
UniProtP0A7R5|RS10_ECOLI Small ribosomal subunit protein uS10 (Gene Name=rpsJ)

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