Structure of PDB 4u0b Chain J Binding Site BS01
Receptor Information
>4u0b Chain J (length=198) Species:
11698
(Human immunodeficiency virus type 1 (NEW YORK-5 ISOLATE)) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
PIVQNLQGQMVHQCISPRTLNAWVKVVEEKAFSPEVIPMFSALSCGATPQ
DLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPPRGSDIAGTTSTLQE
QIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRD
YVDRFYKTLRAEQTETLLVQNANPDCKTILKALGPGATLEEMMTACQG
Ligand information
>4u0b Chain V (length=14) Species:
9606
(Homo sapiens) [
Search peptide sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
PVLFPGQPFGQPPL
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
4u0b
Host Cofactors and Pharmacologic Ligands Share an Essential Interface in HIV-1 Capsid That Is Lost upon Disassembly.
Resolution
2.8 Å
Binding residue
(original residue number in PDB)
N53 L56 N57 M66 Q67 K70 N74 T107 T108
Binding residue
(residue number reindexed from 1)
N53 L56 N57 M66 Q67 K70 N74 T94 T95
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Biological Process
GO:0016032
viral process
View graph for
Biological Process
External links
PDB
RCSB:4u0b
,
PDBe:4u0b
,
PDBj:4u0b
PDBsum
4u0b
PubMed
25356722
UniProt
P12493
|GAG_HV1N5 Gag polyprotein (Gene Name=gag)
[
Back to BioLiP
]