Structure of PDB 3mxg Chain J Binding Site BS01
Receptor Information
>3mxg Chain J (length=70) Species:
83334
(Escherichia coli O157:H7) [
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ADCAKGKIEFSKYNEDDTFTVKVDGKEYWTSRWNLQPLLLSAQLTGMTVT
IKSSTCESGSGFAEVQFNND
Ligand information
Ligand ID
XLS
InChI
InChI=1S/C5H10O5/c6-1-3(8)5(10)4(9)2-7/h1,3-5,7-10H,2H2/t3-,4+,5+/m0/s1
InChIKey
PYMYPHUHKUWMLA-VPENINKCSA-N
SMILES
Software
SMILES
ACDLabs 10.04
O=CC(O)C(O)C(O)CO
CACTVS 3.341
OC[CH](O)[CH](O)[CH](O)C=O
OpenEye OEToolkits 1.5.0
C([C@H]([C@@H]([C@H](C=O)O)O)O)O
CACTVS 3.341
OC[C@@H](O)[C@H](O)[C@@H](O)C=O
OpenEye OEToolkits 1.5.0
C(C(C(C(C=O)O)O)O)O
Formula
C5 H10 O5
Name
D-xylose;
D-XYLOSE (LINEAR FORM)
ChEMBL
CHEMBL1236821
DrugBank
DB09419
ZINC
ZINC000018168715
PDB chain
3mxg Chain B Residue 71 [
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Receptor-Ligand Complex Structure
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PDB
3mxg
Molecular basis of differential B-pentamer stability of Shiga toxins 1 and 2.
Resolution
2.49 Å
Binding residue
(original residue number in PDB)
D16 W29
Binding residue
(residue number reindexed from 1)
D16 W29
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Biological Process
GO:0019836
hemolysis by symbiont of host erythrocytes
Cellular Component
GO:0005576
extracellular region
View graph for
Biological Process
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Cellular Component
External links
PDB
RCSB:3mxg
,
PDBe:3mxg
,
PDBj:3mxg
PDBsum
3mxg
PubMed
21203383
UniProt
A7UQX3
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