Structure of PDB 3cch Chain J Binding Site BS01
Receptor Information
>3cch Chain J (length=272) Species:
10090
(Mus musculus) [
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GPHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAP
WMEQEGPEYWERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMSG
CDLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQS
GAAEHYKAYLEGECVEWLHRYLKNGLRTDSPKAHVTHHPRSKGEVTLRCW
ALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTFQKWASVVVPLGKE
QNYTCRVYHEGLPEPLTLRWEP
Ligand information
>3cch Chain L (length=9) [
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EGSRNQDWL
Receptor-Ligand Complex Structure
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PDB
3cch
Design of agonistic altered peptides for the robust induction of CTL directed towards H-2Db in complex with the melanoma-associated epitope gp100.
Resolution
2.6 Å
Binding residue
(original residue number in PDB)
M5 Y7 E63 K66 Q70 W73 S77 Y84 Q97 T143 K146 W147 S150 A152 H155 Y156 Y159 W167 Y171
Binding residue
(residue number reindexed from 1)
M5 Y7 E63 K66 Q70 W73 S77 Y84 Q97 T143 K146 W147 S150 A152 H155 Y156 Y159 W167 Y171
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:3cch
,
PDBe:3cch
,
PDBj:3cch
PDBsum
3cch
PubMed
19789338
UniProt
P01899
|HA11_MOUSE H-2 class I histocompatibility antigen, D-B alpha chain (Gene Name=H2-D1)
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