Structure of PDB 1n5a Chain J Binding Site BS01

Receptor Information
>1n5a Chain J (length=273) Species: 10090 (Mus musculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAPW
MEQEGPEYWERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMSGC
DLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQSG
AAEHYKAYLEGECVEWLHRYLKNGNATLLRTDSPKAHVTHHPRSKGEVTL
RCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTFQKWASVVVPL
GKEQNYTCRVYHEGLPEPLTLRW
Ligand information
>1n5a Chain L (length=9) Species: 3052303 (Mammarenavirus choriomeningitidis) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
KAVYNFATM
Receptor-Ligand Complex Structure
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PDB1n5a A Structural Basis for LCMV Immune Evasion. Subversion of H-2D(b) and H-2K(b) Presentation of gp33 Revealed by Comparative Crystal Structure Analyses.
Resolution2.85 Å
Binding residue
(original residue number in PDB)		Y7 E63 K66 Q70 W73 S77 Y84 Q97 F116 T143 W147 H155 Y156 Y159 W167 Y171
Binding residue
(residue number reindexed from 1)		Y6 E62 K65 Q69 W72 S76 Y83 Q96 F115 T142 W146 H154 Y155 Y158 W166 Y170
Enzymatic activity
Enzyme Commision number ?
External links
PDB RCSB:1n5a, PDBe:1n5a, PDBj:1n5a
PDBsum1n5a
PubMed12479822
UniProtP01899|HA11_MOUSE H-2 class I histocompatibility antigen, D-B alpha chain (Gene Name=H2-D1)

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