Structure of PDB 9cc9 Chain I Binding Site BS01
Receptor Information
>9cc9 Chain I (length=849) Species:
4100
(Nicotiana benthamiana) [
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EVENLLQLLTDNVSAKGELENLLKEVQHLKGFLDDAAKLPSDSEQWKVLV
EEIQKTVHTAEDAVDKFVVQAKLHKEKNKMARILDVGHLATVRNLAAEVK
GIHDQVKELRLNNQALQARPTLELPQQGPALEDDEVVGFDEEANKVINRL
VKESKDLDIIPVVGMPGLGKTTLARKIYKDPKLSYEFFGVHWVYVGQSYK
IKDVFLNILKFFTRRTEDYQHEDVDALAKVIAGFINKGGRCLICLDDVWE
TKVIDYVKTIFPENEKGHRVMMTTRNKVLATYANSDPHDLKFLTPKESFE
LLVKRVFGKKPCPKDLVGHGESIAGKCGGVPLAVVVIAGALRGRPNTSDW
IRVERNVVQHLYTNSEESCLKFVEMSYDHLPQEVQTCFLYCGVFPRGFDI
PSWKVIRLWIAEGLIKPQESYTLEEIAEFYLNDLVNRNLVILQQKRSDGQ
IKTCRLHVMLHQFCKKEASNKWLFQEVSLTPDQAIDPNKSRRLCIQPSNL
KDFLSKKPSAEHVRSFYCFSSKEKQIRGLTPNDIKLIHKAFPLVRVLDVE
SLKFLFSKDFNQLFHLRYIAISGDFNAIPLTFGKFWNLQTLILNTSTSES
TLDVKADIWNMLQLRHLHTNIPAKLQPPTATTSGKASCLQTLCMVAPESC
EKEVLAKACHLKKLSIRGQMAAFLGAYKGGINNLVELKCLEQLKLLNDVL
YMNKAPHLPQTFSQLVRTVKKLTLTNTRFAWSEADKLGQLESLEILKFKE
NAFAGDSWKPKMGFSALRVLWIERAEFETWEASEINFPVLRNLVLMSCDK
LETVPFELANLSDLYEMRLENTSKAVKSAKAILESKTDKNIKFNLTIFP
Ligand information
Ligand ID
ATP
InChI
InChI=1S/C10H16N5O13P3/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(26-10)1-25-30(21,22)28-31(23,24)27-29(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H,23,24)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKey
ZKHQWZAMYRWXGA-KQYNXXCUSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O
ACDLabs 10.04
O=P(O)(O)OP(=O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@@](=O)(O)O[P@](=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@](O)(=O)O[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O
Formula
C10 H16 N5 O13 P3
Name
ADENOSINE-5'-TRIPHOSPHATE
ChEMBL
CHEMBL14249
DrugBank
DB00171
ZINC
ZINC000004261765
PDB chain
9cc9 Chain I Residue 901 [
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Receptor-Ligand Complex Structure
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PDB
9cc9
Activation of the helper NRC4 immune receptor forms a hexameric resistosome.
Resolution
3.54 Å
Binding residue
(original residue number in PDB)
L151 E155 V156 V157 P186 G187 L188 G189 K190 T191 T192 D267 R295 L321 R325
Binding residue
(residue number reindexed from 1)
L131 E135 V136 V137 P166 G167 L168 G169 K170 T171 T172 D247 R275 L301 R305
Annotation score
4
External links
PDB
RCSB:9cc9
,
PDBe:9cc9
,
PDBj:9cc9
PDBsum
9cc9
PubMed
39094568
UniProt
A0A5J6DCT7
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