Structure of PDB 8xme Chain I Binding Site BS01

Receptor Information
>8xme Chain I (length=113) Species: 3702 (Arabidopsis thaliana) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
STMKFCRECNNILYPKEDKEQKILLYACRNCDHQEVADNSCVYRNEVHHS
VSERTQILTDVASDPTLPRTKAVRCSKCQHREAVFFQATARGEEGMTLFF
VCCNPNCGHRWRE
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain8xme Chain I Residue 201 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB8xme Transcription of the Plant RNA polymerase IV is prone to backtracking
Resolution3.1 Å
Binding residue
(original residue number in PDB)		C76 C103 C108
Binding residue
(residue number reindexed from 1)		C75 C102 C107
Annotation score4
Gene Ontology
Molecular Function
GO:0005515 protein binding
GO:0046872 metal ion binding
Cellular Component
GO:0000419 RNA polymerase V complex
GO:0000428 DNA-directed RNA polymerase complex
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005665 RNA polymerase II, core complex
GO:0005730 nucleolus

View graph for
Molecular Function
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Cellular Component
External links
PDB RCSB:8xme, PDBe:8xme, PDBj:8xme
PDBsum8xme
PubMed
UniProtQ6NLH0|RPB9A_ARATH DNA-directed RNA polymerases II, IV and V subunit 9A (Gene Name=NRPB9A)

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