Structure of PDB 8spo Chain I Binding Site BS01

Receptor Information
>8spo Chain I (length=371) Species: 429344 (Maribacter polysiphoniae) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RNKIFISHATPDDNDFTRWLALKLIGLGYEVWCDILFLDKGVDFWSNIEK
VIREDTCKFLLVSSSYSNQREGVLKELAVAAKVKKQLKDDKFIIPLAIDE
QLSYDDINIDIVRLNAIDFKMSWARGLKDILEAFEKQKVPKEVADASKSN
LLYQQEIYDSNWLSILSFPEELRVRELTFPAVRYKNYLCTFIPTEEILSG
SYDSNFIRNAECKRLIVQLLNKAFELRMKDKEVQEYEMSNKTAYWLEKGK
LEKDKFEKTMLVGKQKDKNWHFAISGASKLYPFPVLMISSHIFFTADGKK
LIDSSSVQHSSRRRQGKNWWNNTWRTKLLAFIKYLSDDDTSFYLEMGSEE
KVFVSNEPVKFKGNVSYNIPE
Ligand information
>8spo Chain J (length=21) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ugacggcucuaaucuauuagu
.....................
Receptor-Ligand Complex Structure
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PDB8spo Oligomerization-mediated activation of a short prokaryotic Argonaute.
Resolution2.98 Å
Binding residue
(original residue number in PDB)		K211 M287 S288 H340 H358 R362
Binding residue
(residue number reindexed from 1)		K185 M238 S239 H291 H309 R313
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0007165 signal transduction

View graph for
Biological Process
External links
PDB RCSB:8spo, PDBe:8spo, PDBj:8spo
PDBsum8spo
PubMed37494956
UniProtA0A316E683

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