Structure of PDB 8p0j Chain I Binding Site BS01
Receptor Information
>8p0j Chain I (length=276) Species:
10245
(Vaccinia virus) [
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MFEPVPDLNLEASVELGEVNIDQTTPMIKEAHRSKDDERKLALRFFLQRL
YFLDHREIHYLFRCVDAVKDVTITKKNNIIVAPYIALLTIASKGCKLTET
MIEAFFPELYNEHSKKFKFNSQVSIIQEKLGYQFGNYHVYDFEPYYSTVA
LAIRDEHSSGIFNIRQESYLVSSLSEITYRFYLINLKSDLVQWSASTGAV
INQMVNTVLITVYEKLQLVIENDSQFTCSLAVESKLPIKLLKDRNELFTK
FINELKKTSSFKISKRDKDTLLKYFT
Ligand information
>8p0j Chain N (length=39) [
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catttaactttaaataatttacaataaaatgagcatccc
Receptor-Ligand Complex Structure
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PDB
8p0j
Cryo EM map and model of the vaccinia RNA polymerase intermediate pre-initiation open promoter complex (CASP target)
Resolution
2.39 Å
Binding residue
(original residue number in PDB)
K47 K88 N89 K127 S206
Binding residue
(residue number reindexed from 1)
K35 K76 N77 K115 S194
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:8p0j
,
PDBe:8p0j
,
PDBj:8p0j
PDBsum
8p0j
PubMed
UniProt
P20986
|VTF3S_VACCC Intermediate transcription factor 3 small subunit (Gene Name=OPG134)
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