Structure of PDB 8kd9 Chain I Binding Site BS01

Receptor Information
>8kd9 Chain I (length=187) Species: 224324 (Aquifex aeolicus VF5) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
DVFVLDTSVFTNPEIYRTFEEDQRGAMETFIHLALNSRAEFYMPTSVYTE
MRKIMDVGELWAEFEMVVKIRSPRRFQLTVPADFLYEFIEELRYRINKGL
RIAEEHTREASGSEDVGKLIARLREKYREALRQGILDSKEDVDVLLLAYE
LDGVLVSADEGLRTWADKIGIKLIDPKNFKNILESLV
Ligand information
>8kd9 Chain O (length=73) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
aaggcgcguagcucaguagggagagcgccggcccgacacgccggaggucg
gggguucaaguccccccgcgccu
.<<<<<<<..<<<<........>>>>.<<<<<.......>>>>>.....<
<<<<.......>>>>>>>>>>>>
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8kd9 Cryo-EM structure of Aquifex aeolicus minimal protein-only RNase P (HARP) in complex with pre-tRNAs
Resolution2.87 Å
Binding residue
(original residue number in PDB)		T8 N13 K99 R123 E126 K127
Binding residue
(residue number reindexed from 1)		T7 N12 K98 R122 E125 K126
External links
PDB RCSB:8kd9, PDBe:8kd9, PDBj:8kd9
PDBsum8kd9
PubMed
UniProtO67035|RFRNP_AQUAE RNA-free ribonuclease P (Gene Name=aq_880)

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