Structure of PDB 8hr9 Chain I Binding Site BS01
Receptor Information
>8hr9 Chain I (length=836) Species:
562
(Escherichia coli) [
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KIIINLFAPNLPGSTKEDDLIQKSLRDQLVESIRNSIAYGRNVFFVDGTR
GAGKTTFINSVVKSLNSDQDDVKVNIKCLPTIDPTKLPRHEPILVTVTAR
LNKMVSDKLKGYWASNDYRKQKEQWQNHLAQLQRGLHLLTDKEYKPEYFS
DALKLDAQLDYSIGGQDLSEIFEELVKRACEILDCKAILITFDDIDTQFD
AGWDVLESIRKFFNSRKLVVVATGDLRLYSQLIRGKQYENYSKTLLEQEK
ESVRLAERGYMVEHLEQQYLLKLFPVQKRIQLKTMLQLVGEKGKAGKEEI
KVKTEPGMQDIDAIDVRQAIGDAVREGLNLREGSDADMYVNELLKQPVRL
LMQVLQDFYTKKYHATSLSVPNLLRNALYGSMLSSIYRAGLNYEQHRFGM
DSLCKDIFTYVKQDRDFNTGFYLRPQSESEALRNCSIYLASQVSENCQGS
LSKFLQMLLVGCGSVSIFNQFVTELAEKFEQLISEYVAYMSVGRIESASH
WANRCCAVVANSPNDEKIGVFLGMVQLNRKSRQHMPGGYKKFNIDTENGL
AKAAMASSLSTVASNNLMDFCSVFNLIGAIADISACRCERSAITNAFNKV
IAQTTCIVPPWSEATEFSDAITKVEQWLKNVNEIEIGIRPSALLIGKVWS
RFYFNLNNVADQHKTRLYRNAEHGRMASQSNAAKIMRFNVLAFLHAVLVE
ESLYHSVSDREYIGEGLRLNPVTSVDEFEKKIKIIGEKLKADNKTWKNTH
PLFFLLISCPILHPFIFPVGGINCSVKALNKETSFNKLIDEIVGDKLLSD
EEWDYLTKNQQIFQNTITSLNSSTIVGASYDKDTPA
Ligand information
Ligand ID
ATP
InChI
InChI=1S/C10H16N5O13P3/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(26-10)1-25-30(21,22)28-31(23,24)27-29(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H,23,24)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKey
ZKHQWZAMYRWXGA-KQYNXXCUSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O
ACDLabs 10.04
O=P(O)(O)OP(=O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@@](=O)(O)O[P@](=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@](O)(=O)O[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O
Formula
C10 H16 N5 O13 P3
Name
ADENOSINE-5'-TRIPHOSPHATE
ChEMBL
CHEMBL14249
DrugBank
DB00171
ZINC
ZINC000004261765
PDB chain
8hr9 Chain I Residue 1001 [
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Receptor-Ligand Complex Structure
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PDB
8hr9
Molecular basis of RADAR anti-phage supramolecular assemblies.
Resolution
3.03 Å
Binding residue
(original residue number in PDB)
N22 P24 D31 L32 I33 G79 G81 K82 T83 T84 D222 D224 V376 R377
Binding residue
(residue number reindexed from 1)
N10 P12 D19 L20 I21 G51 G53 K54 T55 T56 D194 D196 V348 R349
Annotation score
4
External links
PDB
RCSB:8hr9
,
PDBe:8hr9
,
PDBj:8hr9
PDBsum
8hr9
PubMed
36764292
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