Structure of PDB 8edg Chain I Binding Site BS01
Receptor Information
>8edg Chain I (length=74) Species:
7370
(Musca domestica) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
MDNLEVKAKINQGLYKITPRHKGTSFIWNVLADIQKEDDTLVEGWVFCRK
CEKVLKYTTRQTSNLCRHKCCASL
Ligand information
>8edg Chain N (length=46) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
agagaacaacaacaagtggcttattttgatacttatgcgccacttg
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
8edg
Zinc-finger BED domains drive the formation of the active Hermes transpososome by asymmetric DNA binding.
Resolution
4.64 Å
Binding residue
(original residue number in PDB)
K56 K59 Q64
Binding residue
(residue number reindexed from 1)
K53 K56 Q61
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0046872
metal ion binding
GO:0046983
protein dimerization activity
Biological Process
GO:0006357
regulation of transcription by RNA polymerase II
Cellular Component
GO:0005634
nucleus
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:8edg
,
PDBe:8edg
,
PDBj:8edg
PDBsum
8edg
PubMed
37491363
UniProt
Q25438
[
Back to BioLiP
]