Structure of PDB 8bvh Chain I Binding Site BS01

Receptor Information

>8bvh Chain I (length=262) Species: 287 (Pseudomonas aeruginosa) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

GPAMRIISVNVNGIQAAAERGLLSWLQAQNADVICLQDTRASAFDLDDPS
FQLDGYFLYACDAELPEQGGVALYSRLQPKAVISGLGFETADRYGRYLQA
DFDKVSIATLLLPSGQSGDESLNQKFKFMDDFTHYLSKQRRKRREYIYCG
SLYVAHQKMDVKNWRECQQMPGFLAPERAWLDEVFGNLGYADALREVSRE
GDQFSWWPDSEQAEMLNLGWRFDYQVLTPGLRRFVRNAKLPRQPRFSQHA
PLIVDYDWQLSI

Ligand information

>8bvh Chain A (length=49) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

aaaaauaacaacaagauuuuaaaauccagcagcaacgacaccgaacuac

.................<<<>>>..........................

Receptor-Ligand Complex Structure

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Structure summary

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PDB	8bvh Translational regulation by Hfq-Crc assemblies emerges from polymorphic ribonucleoprotein folding.
Resolution	3.6 Å
Binding residue (original residue number in PDB)	K77 A78 K139 R140 R141
Binding residue (residue number reindexed from 1)	K80 A81 K142 R143 R144

Enzymatic activity

Enzyme Commision number

3.1.11.2: exodeoxyribonuclease III.

Gene Ontology

	Molecular Function
GO:0003824	catalytic activity
GO:0003906	DNA-(apurinic or apyrimidinic site) endonuclease activity
GO:0004518	nuclease activity
GO:0008081	phosphoric diester hydrolase activity
GO:0008311	double-stranded DNA 3'-5' DNA exonuclease activity
GO:0046872	metal ion binding

	Biological Process
GO:0006281	DNA repair
GO:0006284	base-excision repair
GO:0009372	quorum sensing
GO:0043609	regulation of carbon utilization
GO:1900190	regulation of single-species biofilm formation

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Molecular Function

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Biological Process

External links

PDB	RCSB:8bvh, PDBe:8bvh, PDBj:8bvh
PDBsum	8bvh
PubMed	36504222
UniProt	G3XDB0

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